Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
SCN11AQ9UI33 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.73□□□□□ -1.97
SCN11AQ9UI33 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.73□□□□□ -1.97
SCN11AQ9UI33 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SCN11AQ9UI33 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.73□□□□□ -1.97
SCN11AQ9UI33 AC099336.2-201ENST00000422457 254 ntBASIC2.73□□□□□ -1.97
SCN11AQ9UI33 RPS27P5-201ENST00000444247 244 ntBASIC2.73□□□□□ -1.97
SCN11AQ9UI33 HMGB1P48-201ENST00000446155 598 ntBASIC2.73□□□□□ -1.97
SCN11AQ9UI33 UBE2V2P4-201ENST00000447495 259 ntBASIC2.73□□□□□ -1.97
SCN11AQ9UI33 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SCN11AQ9UI33 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.73□□□□□ -1.97
SCN11AQ9UI33 AP004247.3-201ENST00000608682 624 ntBASIC2.73□□□□□ -1.97
SCN11AQ9UI33 AC244517.12-201ENST00000623581 663 ntBASIC2.73□□□□□ -1.97
SCN11AQ9UI33 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.73□□□□□ -1.97
SCN11AQ9UI33 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SCN11AQ9UI33 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SCN11AQ9UI33 AL512646.1-201ENST00000269395 1077 ntBASIC2.72□□□□□ -1.97
SCN11AQ9UI33 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.72□□□□□ -1.97
SCN11AQ9UI33 NF1P5-201ENST00000588287 448 ntBASIC2.72□□□□□ -1.97
SCN11AQ9UI33 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.72□□□□□ -1.97
SCN11AQ9UI33 AC011494.1-201ENST00000596454 237 ntBASIC2.72□□□□□ -1.97
SCN11AQ9UI33 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.72□□□□□ -1.97
SCN11AQ9UI33 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.72□□□□□ -1.97
SCN11AQ9UI33 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.72□□□□□ -1.97
SCN11AQ9UI33 MTND5P29-201ENST00000458676 1807 ntBASIC2.72□□□□□ -1.97
SCN11AQ9UI33 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
SCN11AQ9UI33 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SCN11AQ9UI33 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.72□□□□□ -1.97
SCN11AQ9UI33 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.72□□□□□ -1.97
SCN11AQ9UI33 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.72□□□□□ -1.97
SCN11AQ9UI33 AC108667.1-201ENST00000428618 249 ntBASIC2.72□□□□□ -1.97
SCN11AQ9UI33 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.72□□□□□ -1.97
SCN11AQ9UI33 MIR5002-201ENST00000584713 97 ntBASIC2.72□□□□□ -1.97
SCN11AQ9UI33 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.72□□□□□ -1.97
SCN11AQ9UI33 AC010297.1-201ENST00000623948 149 ntBASIC2.72□□□□□ -1.97
SCN11AQ9UI33 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.71□□□□□ -1.97
SCN11AQ9UI33 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
SCN11AQ9UI33 AL161431.1-201ENST00000618966 4205 ntBASIC2.71□□□□□ -1.97
SCN11AQ9UI33 API5P2-201ENST00000397055 1498 ntBASIC2.71□□□□□ -1.98
SCN11AQ9UI33 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SCN11AQ9UI33 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SCN11AQ9UI33 AC004866.2-201ENST00000438285 481 ntBASIC2.71□□□□□ -1.98
SCN11AQ9UI33 USP9YP8-201ENST00000441913 500 ntBASIC2.71□□□□□ -1.98
SCN11AQ9UI33 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.71□□□□□ -1.98
SCN11AQ9UI33 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.71□□□□□ -1.98
SCN11AQ9UI33 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.71□□□□□ -1.98
SCN11AQ9UI33 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.71□□□□□ -1.98
SCN11AQ9UI33 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.71□□□□□ -1.98
SCN11AQ9UI33 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.71□□□□□ -1.98
SCN11AQ9UI33 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.71□□□□□ -1.98
SCN11AQ9UI33 SNORA67.3-201ENST00000384366 140 ntBASIC2.7□□□□□ -1.98
SCN11AQ9UI33 MIR489-201ENST00000384923 84 ntBASIC2.7□□□□□ -1.98
SCN11AQ9UI33 TVP23BP2-201ENST00000455082 615 ntBASIC2.7□□□□□ -1.98
SCN11AQ9UI33 SNRPGP3-201ENST00000469405 227 ntBASIC2.7□□□□□ -1.98
SCN11AQ9UI33 AC098583.1-201ENST00000480875 255 ntBASIC2.7□□□□□ -1.98
SCN11AQ9UI33 AC091917.2-201ENST00000505002 744 ntBASIC2.7□□□□□ -1.98
SCN11AQ9UI33 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.7□□□□□ -1.98
SCN11AQ9UI33 RNU6-826P-201ENST00000516827 104 ntBASIC2.7□□□□□ -1.98
SCN11AQ9UI33 AC068339.2-201ENST00000534395 618 ntBASIC2.7□□□□□ -1.98
SCN11AQ9UI33 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.7□□□□□ -1.98
SCN11AQ9UI33 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.7□□□□□ -1.98
SCN11AQ9UI33 MIR6132-201ENST00000622083 109 ntBASIC2.7□□□□□ -1.98
SCN11AQ9UI33 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SCN11AQ9UI33 AL359893.1-201ENST00000447628 1580 ntBASIC2.7□□□□□ -1.98
SCN11AQ9UI33 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SCN11AQ9UI33 SETP8-201ENST00000435341 628 ntBASIC2.69□□□□□ -1.98
SCN11AQ9UI33 SNRPFP2-201ENST00000440710 251 ntBASIC2.69□□□□□ -1.98
SCN11AQ9UI33 AC009961.3-201ENST00000449832 765 ntBASIC2.69□□□□□ -1.98
SCN11AQ9UI33 AC012170.1-201ENST00000495139 359 ntBASIC2.69□□□□□ -1.98
SCN11AQ9UI33 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.69□□□□□ -1.98
SCN11AQ9UI33 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.69□□□□□ -1.98
SCN11AQ9UI33 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.69□□□□□ -1.98
SCN11AQ9UI33 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.69□□□□□ -1.98
SCN11AQ9UI33 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.69□□□□□ -1.98
SCN11AQ9UI33 MIR3670-2-201ENST00000582974 65 ntBASIC2.69□□□□□ -1.98
SCN11AQ9UI33 MIR3670-1-201ENST00000584160 65 ntBASIC2.69□□□□□ -1.98
SCN11AQ9UI33 MIR3670-3-201ENST00000584855 65 ntBASIC2.69□□□□□ -1.98
SCN11AQ9UI33 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.69□□□□□ -1.98
SCN11AQ9UI33 MIR3670-4-201ENST00000612260 65 ntBASIC2.69□□□□□ -1.98
SCN11AQ9UI33 MTND5P7-201ENST00000413558 1798 ntBASIC2.69□□□□□ -1.98
SCN11AQ9UI33 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SCN11AQ9UI33 MIR7-2-201ENST00000384970 110 ntBASIC2.69□□□□□ -1.98
SCN11AQ9UI33 AC048351.1-201ENST00000420064 602 ntBASIC2.69□□□□□ -1.98
SCN11AQ9UI33 AC129850.1-201ENST00000436203 508 ntBASIC2.69□□□□□ -1.98
SCN11AQ9UI33 AC117522.2-201ENST00000510049 657 ntBASIC2.69□□□□□ -1.98
SCN11AQ9UI33 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.69□□□□□ -1.98
SCN11AQ9UI33 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.69□□□□□ -1.98
SCN11AQ9UI33 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.69□□□□□ -1.98
SCN11AQ9UI33 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SCN11AQ9UI33 YWHAEP7-203ENST00000622054 312 ntBASIC2.69□□□□□ -1.98
SCN11AQ9UI33 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
SCN11AQ9UI33 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SCN11AQ9UI33 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
SCN11AQ9UI33 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SCN11AQ9UI33 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SCN11AQ9UI33 AL445646.1-201ENST00000431784 216 ntBASIC2.68□□□□□ -1.98
SCN11AQ9UI33 HSPE1P22-201ENST00000456856 327 ntBASIC2.68□□□□□ -1.98
SCN11AQ9UI33 CCNHP1-201ENST00000513311 678 ntBASIC2.68□□□□□ -1.98
SCN11AQ9UI33 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.68□□□□□ -1.98
SCN11AQ9UI33 RNU6-295P-201ENST00000516901 104 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms