Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.94□□□□□ -1.62
PPARGC1AQ9UBK2 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.94□□□□□ -1.62
PPARGC1AQ9UBK2 AC130324.3-201ENST00000614165 542 ntBASIC4.94□□□□□ -1.62
PPARGC1AQ9UBK2 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.94□□□□□ -1.62
PPARGC1AQ9UBK2 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PPARGC1AQ9UBK2 AL023881.1-201ENST00000621088 301 ntBASIC4.94□□□□□ -1.62
PPARGC1AQ9UBK2 AL159972.1-201ENST00000625150 448 ntBASIC4.94□□□□□ -1.62
PPARGC1AQ9UBK2 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PPARGC1AQ9UBK2 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.94□□□□□ -1.62
PPARGC1AQ9UBK2 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PPARGC1AQ9UBK2 AC090229.1-201ENST00000590983 1609 ntBASIC4.94□□□□□ -1.62
PPARGC1AQ9UBK2 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 RNA5SP191-201ENST00000362585 102 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 RNU6-223P-201ENST00000362830 107 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 Y_RNA.356-201ENST00000365475 113 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 AL592291.1-201ENST00000403830 352 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 BX510359.2-201ENST00000417920 305 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 RPS15AP40-201ENST00000419621 391 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 FABP7P1-201ENST00000424004 391 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 EIF4HP2-201ENST00000424380 563 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 AC008850.1-201ENST00000427546 362 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 RPL23AP30-201ENST00000432419 501 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 RPL36AP53-201ENST00000432891 316 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 AC127537.2-201ENST00000439258 465 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 BNIP3P2-201ENST00000441221 577 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 MRPL48P1-201ENST00000445390 636 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 CBWD4P-201ENST00000445695 655 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 AC104651.2-201ENST00000447549 528 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 NANOGP10-201ENST00000453325 895 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 RPL5P30-201ENST00000465511 891 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 AC083982.1-201ENST00000485679 344 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 AC093278.1-201ENST00000494700 600 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 HMGB1P21-201ENST00000502313 581 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 AC021146.1-201ENST00000511202 716 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 RNU6-1220P-201ENST00000517126 108 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 AP001880.2-201ENST00000538233 448 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 AC125611.2-201ENST00000551907 647 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 RPS3AP23-202ENST00000574601 686 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 AC091042.1-201ENST00000579213 173 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 Z84480.1-201ENST00000605131 311 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 SNORD91B-202ENST00000608459 222 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 MAPK10-349ENST00000641767 3661 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 MAPK10-263ENST00000641052 4307 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 AL138713.1-201ENST00000624026 2130 ntBASIC4.93□□□□□ -1.62
PPARGC1AQ9UBK2 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 AC006020.1-201ENST00000420179 1854 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 Y_RNA.255-201ENST00000364581 97 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 Y_RNA.529-201ENST00000384586 119 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 ENSAP1-201ENST00000392855 326 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 AL136116.1-201ENST00000403591 381 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 AP000580.1-201ENST00000404439 358 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 RNU2-9P-201ENST00000410194 145 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 ATP5JP1-201ENST00000431631 322 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 AC006466.1-201ENST00000438721 289 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 RPS15AP9-201ENST00000439856 381 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 AL353691.1-201ENST00000451332 387 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 RPL35AP28-201ENST00000459730 331 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 RPS4XP10-201ENST00000465034 731 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 COX7A2P2-201ENST00000505291 250 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 RNA5SP401-201ENST00000515920 127 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 RN7SKP276-201ENST00000516242 268 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 SNORD27.1-201ENST00000516319 72 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 SCARNA24.1-201ENST00000516465 137 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms