Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.47□□□□□ -1.69
COL20A1Q9P218 LARP1BP2-201ENST00000486594 519 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.47□□□□□ -1.69
COL20A1Q9P218 RNU6-405P-201ENST00000516637 110 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.47□□□□□ -1.69
COL20A1Q9P218 AP002748.2-201ENST00000528671 348 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.47□□□□□ -1.69
COL20A1Q9P218 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.47□□□□□ -1.69
COL20A1Q9P218 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.47□□□□□ -1.69
COL20A1Q9P218 PDCD5P1-201ENST00000543528 309 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 EEF1B2P4-201ENST00000551398 348 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.47□□□□□ -1.69
COL20A1Q9P218 ZNF519P3-201ENST00000557158 1032 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 HMGB3P26-201ENST00000560051 582 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 AL121834.1-201ENST00000572284 509 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.47□□□□□ -1.69
COL20A1Q9P218 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.47□□□□□ -1.69
COL20A1Q9P218 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.47□□□□□ -1.69
COL20A1Q9P218 AC104662.1-201ENST00000604448 511 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 MIR92B-201ENST00000607575 96 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 AC109347.2-201ENST00000610220 349 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 CR392039.5-201ENST00000623201 510 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 AL603839.4-201ENST00000624658 1005 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 BMS1P21-201ENST00000634565 365 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 MIR6715B-201ENST00000637172 77 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 AL773545.4-201ENST00000637262 310 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 AL513478.4-201ENST00000641636 310 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL20A1Q9P218 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.47□□□□□ -1.69
COL20A1Q9P218 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.47□□□□□ -1.69
COL20A1Q9P218 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
COL20A1Q9P218 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL20A1Q9P218 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL20A1Q9P218 CCT4P2-201ENST00000233836 1548 ntBASIC4.46□□□□□ -1.69
COL20A1Q9P218 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
COL20A1Q9P218 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
COL20A1Q9P218 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL20A1Q9P218 AC027287.1-201ENST00000553115 1453 ntBASIC4.46□□□□□ -1.7
COL20A1Q9P218 RNU6-97P-201ENST00000363387 104 ntBASIC4.46□□□□□ -1.7
COL20A1Q9P218 Y_RNA.234-201ENST00000364409 97 ntBASIC4.46□□□□□ -1.7
COL20A1Q9P218 RNU6-359P-201ENST00000365466 108 ntBASIC4.46□□□□□ -1.7
COL20A1Q9P218 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL20A1Q9P218 RNU6ATAC-201ENST00000408749 126 ntBASIC4.46□□□□□ -1.7
COL20A1Q9P218 RNA5SP56-201ENST00000410277 118 ntBASIC4.46□□□□□ -1.7
COL20A1Q9P218 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.46□□□□□ -1.7
COL20A1Q9P218 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.46□□□□□ -1.7
COL20A1Q9P218 MTCYBP45-201ENST00000435243 565 ntBASIC4.46□□□□□ -1.7
COL20A1Q9P218 AL133547.1-201ENST00000448546 220 ntBASIC4.46□□□□□ -1.7
COL20A1Q9P218 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.46□□□□□ -1.7
COL20A1Q9P218 Z82190.1-201ENST00000454534 490 ntBASIC4.46□□□□□ -1.7
COL20A1Q9P218 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.46□□□□□ -1.7
COL20A1Q9P218 AP1S2P1-201ENST00000457344 379 ntBASIC4.46□□□□□ -1.7
COL20A1Q9P218 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.46□□□□□ -1.7
COL20A1Q9P218 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.46□□□□□ -1.7
COL20A1Q9P218 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.46□□□□□ -1.7
COL20A1Q9P218 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL20A1Q9P218 TMEM248P1-201ENST00000510579 951 ntBASIC4.46□□□□□ -1.7
COL20A1Q9P218 PTGES3P3-201ENST00000511479 482 ntBASIC4.46□□□□□ -1.7
COL20A1Q9P218 RNU6-27P-201ENST00000516146 107 ntBASIC4.46□□□□□ -1.7
COL20A1Q9P218 RNU6-714P-201ENST00000516963 103 ntBASIC4.46□□□□□ -1.7
COL20A1Q9P218 IGKV2-38-201ENST00000517443 247 ntBASIC4.46□□□□□ -1.7
COL20A1Q9P218 SETP2-201ENST00000553886 926 ntBASIC4.46□□□□□ -1.7
COL20A1Q9P218 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.46□□□□□ -1.7
COL20A1Q9P218 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.46□□□□□ -1.7
COL20A1Q9P218 MTND6P33-201ENST00000571794 183 ntBASIC4.46□□□□□ -1.7
COL20A1Q9P218 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.46□□□□□ -1.7
COL20A1Q9P218 AL669831.4-202ENST00000590817 238 ntBASIC4.46□□□□□ -1.7
COL20A1Q9P218 AC080078.2-201ENST00000603766 501 ntBASIC4.46□□□□□ -1.7
COL20A1Q9P218 AL136363.2-201ENST00000604173 851 ntBASIC4.46□□□□□ -1.7
COL20A1Q9P218 AC091925.2-201ENST00000625059 256 ntBASIC4.46□□□□□ -1.7
COL20A1Q9P218 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.46□□□□□ -1.7
COL20A1Q9P218 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.46□□□□□ -1.7
COL20A1Q9P218 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL20A1Q9P218 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.46□□□□□ -1.7
COL20A1Q9P218 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL20A1Q9P218 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL20A1Q9P218 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
COL20A1Q9P218 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL20A1Q9P218 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
COL20A1Q9P218 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL20A1Q9P218 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL20A1Q9P218 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL20A1Q9P218 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.45□□□□□ -1.7
COL20A1Q9P218 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL20A1Q9P218 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL20A1Q9P218 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL20A1Q9P218 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COL20A1Q9P218 SNORA62.3-201ENST00000365110 153 ntBASIC4.45□□□□□ -1.7
COL20A1Q9P218 RNU6-1207P-201ENST00000384343 107 ntBASIC4.45□□□□□ -1.7
COL20A1Q9P218 SNORD115.1-201ENST00000391109 76 ntBASIC4.45□□□□□ -1.7
COL20A1Q9P218 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.45□□□□□ -1.7
COL20A1Q9P218 AIMP1P1-201ENST00000418670 937 ntBASIC4.45□□□□□ -1.7
COL20A1Q9P218 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.45□□□□□ -1.7
COL20A1Q9P218 AC006548.1-201ENST00000427470 102 ntBASIC4.45□□□□□ -1.7
COL20A1Q9P218 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.45□□□□□ -1.7
COL20A1Q9P218 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.45□□□□□ -1.7
COL20A1Q9P218 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.45□□□□□ -1.7
COL20A1Q9P218 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.45□□□□□ -1.7
COL20A1Q9P218 AC108734.1-201ENST00000439549 399 ntBASIC4.45□□□□□ -1.7
COL20A1Q9P218 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms