Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 RPS7P15-201ENST00000415804 584 ntBASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 UQCRBP1-201ENST00000421129 336 ntBASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 Z74021.1-201ENST00000423610 407 ntBASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 AC093414.1-201ENST00000434712 514 ntBASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 AL451139.1-201ENST00000434718 346 ntBASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 KNOP1P3-201ENST00000446933 426 ntBASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 AC000111.2-201ENST00000448200 210 ntBASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 AC006967.1-201ENST00000467608 589 ntBASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 RPS3AP50-201ENST00000487064 803 ntBASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 RNA5SP392-201ENST00000516905 112 ntBASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 RNU6-1220P-201ENST00000517126 108 ntBASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 AC008033.2-201ENST00000542626 177 ntBASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 FKBP1BP1-201ENST00000553366 325 ntBASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 RPL21P12-201ENST00000559810 515 ntBASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 AC090616.5-202ENST00000582111 297 ntBASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 AC068790.4-201ENST00000602474 263 ntBASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 AC007621.1-201ENST00000604544 437 ntBASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 AC083809.1-201ENST00000615051 472 ntBASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 AC005609.4-201ENST00000625071 447 ntBASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 MIR1321-201ENST00000637766 79 ntBASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 AC074029.4-201ENST00000624796 1859 ntBASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 DHX40P1-201ENST00000588725 1412 ntBASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCM2LQ9NUG4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 MAPK10-286ENST00000641208 8747 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 CR848007.1-201ENST00000442354 1699 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AC126755.2-208ENST00000327792 462 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AC138969.1-213ENST00000331436 462 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 HSPE1P11-201ENST00000339579 310 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 RNU1-108P-201ENST00000362556 161 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 RNU6-1090P-201ENST00000364065 94 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 RNA5SP505-201ENST00000364748 108 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AL357515.1-201ENST00000402967 542 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AL583834.1-201ENST00000406943 343 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 RNA5SP345-201ENST00000410646 108 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 EIF4EP1-201ENST00000422311 642 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 MTCO1P20-201ENST00000425366 358 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AC068287.1-201ENST00000430283 295 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 MTCO3P18-201ENST00000440206 761 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AL662791.1-201ENST00000441992 928 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AC027673.1-201ENST00000456245 405 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 SNORD108-201ENST00000459332 71 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AC097484.1-201ENST00000471148 389 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AC135721.1-201ENST00000497954 479 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 Y_RNA.704-201ENST00000516851 102 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 DEFB108D-201ENST00000527787 222 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AC021006.3-201ENST00000530771 192 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AC118273.2-201ENST00000532092 465 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 TOMM20P2-201ENST00000540082 421 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AC018630.1-201ENST00000541376 925 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AC126177.3-201ENST00000551839 688 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AC015912.2-201ENST00000571053 181 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 OR4K8P-201ENST00000578842 1048 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 MIR548S-201ENST00000581352 82 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 SNORD84-203ENST00000584275 78 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AC098848.2-201ENST00000588023 330 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AC010680.3-201ENST00000604215 520 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AL008636.1-201ENST00000625038 1018 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 AL136964.1-201ENST00000622038 2990 ntBASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.52□□□□□ -1.69
CCM2LQ9NUG4 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCM2LQ9NUG4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCM2LQ9NUG4 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms