Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 EIF4A1P3-201ENST00000411521 244 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 AL133384.1-201ENST00000412744 351 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 CEACAMP1-201ENST00000434624 1035 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 RPS26P56-201ENST00000444468 240 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 MRPL48P1-201ENST00000445390 636 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 AL121877.1-201ENST00000453704 622 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 SCARNA10-201ENST00000459255 330 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 APOOP2-201ENST00000461561 539 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 PABPC1P3-201ENST00000469174 459 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 AC020890.1-201ENST00000491837 504 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 AP002812.1-201ENST00000495378 474 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 AC103851.1-201ENST00000506833 274 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 PCBP2P3-201ENST00000509726 843 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 RNA5SP315-201ENST00000516340 116 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 RNA5SP312-201ENST00000517068 116 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 RNU6-1220P-201ENST00000517126 108 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 AC023050.3-201ENST00000541142 333 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 PDCD5P1-201ENST00000543528 309 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 LLPHP1-201ENST00000603571 367 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 AC233309.1-201ENST00000619522 751 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 AL731532.2-201ENST00000623542 1953 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 DDX18P3-201ENST00000404856 2007 ntBASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.16□□□□□ -1.58
PDLIM7Q9NR12 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
PDLIM7Q9NR12 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.15□□□□□ -1.58
PDLIM7Q9NR12 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PDLIM7Q9NR12 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.15□□□□□ -1.58
PDLIM7Q9NR12 AC021146.4-201ENST00000309229 279 ntBASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 RNU6-169P-201ENST00000365336 107 ntBASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 Y_RNA.431-201ENST00000384086 102 ntBASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 AL354719.1-201ENST00000406535 843 ntBASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 RN7SKP32-201ENST00000410167 303 ntBASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 AC011933.1-201ENST00000413334 321 ntBASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 MTCO3P12-201ENST00000416718 547 ntBASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 AC007283.2-201ENST00000424739 197 ntBASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 ATP5JP1-201ENST00000431631 322 ntBASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 AC119618.1-201ENST00000434191 222 ntBASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 RPL23AP74-201ENST00000437246 471 ntBASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 AC116533.1-201ENST00000459748 321 ntBASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 RN7SL810P-201ENST00000493031 276 ntBASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 AC107934.1-201ENST00000522215 217 ntBASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 AC022616.3-201ENST00000523940 148 ntBASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 ZNF705CP-201ENST00000530515 889 ntBASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 AL360085.1-201ENST00000604713 532 ntBASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 AL591034.3-201ENST00000605511 685 ntBASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 AC091979.2-201ENST00000607514 214 ntBASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 AC006133.1-201ENST00000617106 264 ntBASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 AC009248.2-201ENST00000619826 254 ntBASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 TPTEP1-208ENST00000636884 213 ntBASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDLIM7Q9NR12 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 AL592437.2-201ENST00000421655 2434 ntBASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms