Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.84□□□□□ -1.63
VTA1Q9NP79 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.84□□□□□ -1.63
VTA1Q9NP79 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.84□□□□□ -1.63
VTA1Q9NP79 RNU6-27P-201ENST00000516146 107 ntBASIC4.84□□□□□ -1.63
VTA1Q9NP79 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
VTA1Q9NP79 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.84□□□□□ -1.63
VTA1Q9NP79 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.84□□□□□ -1.63
VTA1Q9NP79 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.84□□□□□ -1.63
VTA1Q9NP79 AC099489.2-201ENST00000574976 260 ntBASIC4.84□□□□□ -1.63
VTA1Q9NP79 AL669831.4-202ENST00000590817 238 ntBASIC4.84□□□□□ -1.63
VTA1Q9NP79 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.84□□□□□ -1.63
VTA1Q9NP79 AC068790.3-201ENST00000602988 553 ntBASIC4.84□□□□□ -1.63
VTA1Q9NP79 LLPHP1-201ENST00000603571 367 ntBASIC4.84□□□□□ -1.63
VTA1Q9NP79 AL160290.3-201ENST00000604869 165 ntBASIC4.84□□□□□ -1.63
VTA1Q9NP79 AC010201.1-201ENST00000605051 540 ntBASIC4.84□□□□□ -1.63
VTA1Q9NP79 Z98200.1-201ENST00000607298 470 ntBASIC4.84□□□□□ -1.63
VTA1Q9NP79 AC002550.2-201ENST00000621246 394 ntBASIC4.84□□□□□ -1.63
VTA1Q9NP79 AC124864.2-201ENST00000624736 186 ntBASIC4.84□□□□□ -1.63
VTA1Q9NP79 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VTA1Q9NP79 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.84□□□□□ -1.63
VTA1Q9NP79 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.84□□□□□ -1.63
VTA1Q9NP79 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VTA1Q9NP79 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
VTA1Q9NP79 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.83□□□□□ -1.64
VTA1Q9NP79 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.83□□□□□ -1.64
VTA1Q9NP79 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
VTA1Q9NP79 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.83□□□□□ -1.64
VTA1Q9NP79 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.83□□□□□ -1.64
VTA1Q9NP79 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
VTA1Q9NP79 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
VTA1Q9NP79 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
VTA1Q9NP79 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.83□□□□□ -1.64
VTA1Q9NP79 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VTA1Q9NP79 RPL23AP32-201ENST00000395315 459 ntBASIC4.83□□□□□ -1.64
VTA1Q9NP79 AC078974.1-201ENST00000411597 223 ntBASIC4.83□□□□□ -1.64
VTA1Q9NP79 MTND1P21-201ENST00000412991 285 ntBASIC4.83□□□□□ -1.64
VTA1Q9NP79 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.83□□□□□ -1.64
VTA1Q9NP79 AC245052.5-201ENST00000416320 649 ntBASIC4.83□□□□□ -1.64
VTA1Q9NP79 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.83□□□□□ -1.64
VTA1Q9NP79 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.83□□□□□ -1.64
VTA1Q9NP79 USP9YP18-201ENST00000425912 695 ntBASIC4.83□□□□□ -1.64
VTA1Q9NP79 AL589872.1-201ENST00000426602 288 ntBASIC4.83□□□□□ -1.64
VTA1Q9NP79 AL049734.2-201ENST00000441066 616 ntBASIC4.83□□□□□ -1.64
VTA1Q9NP79 RPL21P89-201ENST00000444021 467 ntBASIC4.83□□□□□ -1.64
VTA1Q9NP79 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.83□□□□□ -1.64
VTA1Q9NP79 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.83□□□□□ -1.64
VTA1Q9NP79 FGF7P6-202ENST00000451282 293 ntBASIC4.83□□□□□ -1.64
VTA1Q9NP79 AC104308.1-201ENST00000454621 333 ntBASIC4.83□□□□□ -1.64
VTA1Q9NP79 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VTA1Q9NP79 AL359385.1-201ENST00000456509 365 ntBASIC4.83□□□□□ -1.64
VTA1Q9NP79 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VTA1Q9NP79 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.83□□□□□ -1.64
VTA1Q9NP79 AC114967.1-201ENST00000504890 259 ntBASIC4.83□□□□□ -1.64
VTA1Q9NP79 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.83□□□□□ -1.64
VTA1Q9NP79 MED28P5-201ENST00000528254 438 ntBASIC4.83□□□□□ -1.64
VTA1Q9NP79 AP003497.1-201ENST00000528472 562 ntBASIC4.83□□□□□ -1.64
VTA1Q9NP79 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.83□□□□□ -1.64
VTA1Q9NP79 DYNLL1P4-201ENST00000549314 266 ntBASIC4.83□□□□□ -1.64
VTA1Q9NP79 AC034105.4-201ENST00000568304 277 ntBASIC4.83□□□□□ -1.64
VTA1Q9NP79 RPL23AP97-201ENST00000568955 471 ntBASIC4.83□□□□□ -1.64
VTA1Q9NP79 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.83□□□□□ -1.64
VTA1Q9NP79 AC112230.1-201ENST00000604342 547 ntBASIC4.83□□□□□ -1.64
VTA1Q9NP79 RNA5SP108-201ENST00000605921 117 ntBASIC4.83□□□□□ -1.64
VTA1Q9NP79 RNU4-89P-201ENST00000607443 133 ntBASIC4.83□□□□□ -1.64
VTA1Q9NP79 AC098614.4-201ENST00000607601 462 ntBASIC4.83□□□□□ -1.64
VTA1Q9NP79 CR381653.2-201ENST00000624041 768 ntBASIC4.83□□□□□ -1.64
VTA1Q9NP79 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
VTA1Q9NP79 AC012020.1-201ENST00000624541 1728 ntBASIC4.83□□□□□ -1.64
VTA1Q9NP79 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
VTA1Q9NP79 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.82□□□□□ -1.64
VTA1Q9NP79 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
VTA1Q9NP79 MAPK10-320ENST00000641462 6696 ntBASIC4.82□□□□□ -1.64
VTA1Q9NP79 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VTA1Q9NP79 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VTA1Q9NP79 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
VTA1Q9NP79 RNU1-20P-201ENST00000363314 162 ntBASIC4.82□□□□□ -1.64
VTA1Q9NP79 RNA5SP130-201ENST00000364431 114 ntBASIC4.82□□□□□ -1.64
VTA1Q9NP79 RNA5SP513-201ENST00000364648 118 ntBASIC4.82□□□□□ -1.64
VTA1Q9NP79 RNU6-1103P-201ENST00000384150 107 ntBASIC4.82□□□□□ -1.64
VTA1Q9NP79 RPL17P50-201ENST00000396131 546 ntBASIC4.82□□□□□ -1.64
VTA1Q9NP79 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.82□□□□□ -1.64
VTA1Q9NP79 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.82□□□□□ -1.64
VTA1Q9NP79 AC137499.1-201ENST00000427602 88 ntBASIC4.82□□□□□ -1.64
VTA1Q9NP79 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.82□□□□□ -1.64
VTA1Q9NP79 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.82□□□□□ -1.64
VTA1Q9NP79 AL139099.1-201ENST00000497398 403 ntBASIC4.82□□□□□ -1.64
VTA1Q9NP79 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.82□□□□□ -1.64
VTA1Q9NP79 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.82□□□□□ -1.64
VTA1Q9NP79 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.82□□□□□ -1.64
VTA1Q9NP79 AC020593.1-201ENST00000507399 299 ntBASIC4.82□□□□□ -1.64
VTA1Q9NP79 SLC25A15P5-201ENST00000508033 253 ntBASIC4.82□□□□□ -1.64
VTA1Q9NP79 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.82□□□□□ -1.64
VTA1Q9NP79 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.82□□□□□ -1.64
VTA1Q9NP79 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.82□□□□□ -1.64
VTA1Q9NP79 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.82□□□□□ -1.64
VTA1Q9NP79 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.82□□□□□ -1.64
VTA1Q9NP79 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.82□□□□□ -1.64
VTA1Q9NP79 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.82□□□□□ -1.64
VTA1Q9NP79 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.82□□□□□ -1.64
VTA1Q9NP79 AL356432.3-201ENST00000568952 465 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms