Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 BX005214.3-202ENST00000619809 325 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 AL078596.1-201ENST00000624856 447 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 AC130650.2-201ENST00000618736 2403 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 NEAT1-202ENST00000501122 22743 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SEC61A2Q9H9S3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SEC61A2Q9H9S3 AC011460.1-201ENST00000636268 1834 ntBASIC4.46□□□□□ -1.69
SEC61A2Q9H9S3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
SEC61A2Q9H9S3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SEC61A2Q9H9S3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
SEC61A2Q9H9S3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 AC244517.1-201ENST00000606030 2086 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 AC007823.1-201ENST00000569932 1566 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 RNU6-552P-201ENST00000362869 119 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 RNA5SP391-201ENST00000363456 119 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 RNA5SP455-201ENST00000365190 119 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 RNU6-1226P-201ENST00000384317 107 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 RNU6-903P-201ENST00000391270 109 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 AL645927.1-201ENST00000396783 406 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 MIR548F5-201ENST00000408421 86 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 RNA5SP345-201ENST00000410646 108 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 BX323014.1-201ENST00000412876 237 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 AC234779.1-201ENST00000425910 285 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 RPL7L1P10-201ENST00000427790 463 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 BRWD1P3-201ENST00000428816 390 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 AC093156.1-201ENST00000440382 670 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 PRPS1P1-201ENST00000445305 876 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 AC073850.1-201ENST00000449243 255 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 AC091685.2-201ENST00000454924 864 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 AC068587.1-201ENST00000483613 781 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 AC004453.1-201ENST00000487895 408 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 RN7SL441P-201ENST00000492388 296 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 AC092436.1-201ENST00000506450 503 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 RNA5SP464-201ENST00000516251 108 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 HMGB1P19-201ENST00000517578 577 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 AC092490.3-201ENST00000545370 572 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 MIR3942-201ENST00000585264 109 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 AC008782.1-201ENST00000603386 430 ntBASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SEC61A2Q9H9S3 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AC011155.1-201ENST00000316512 456 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 RNU6-1309P-201ENST00000363305 108 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 Y_RNA.133-201ENST00000363428 110 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 RN7SKP44-201ENST00000363602 316 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 RNU6-522P-201ENST00000364497 107 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 RNU6-1105P-201ENST00000384774 107 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 SNORA66-201ENST00000384792 133 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 MIR454-201ENST00000390180 115 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AC069218.2-201ENST00000411665 344 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 GSTM3P2-201ENST00000412746 530 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AC093162.1-201ENST00000419682 124 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AC108734.1-201ENST00000439549 399 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 RPS26P56-201ENST00000444468 240 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AL031584.1-201ENST00000447169 754 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 MRPS31P2-201ENST00000451581 518 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AP001992.1-205ENST00000462248 379 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms