Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC013262.1-201ENST00000426710 252 ntBASIC3.49□□□□□ -1.85
CCSER1Q9C0I3 HMGN2P20-201ENST00000437531 273 ntBASIC3.49□□□□□ -1.85
CCSER1Q9C0I3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.49□□□□□ -1.85
CCSER1Q9C0I3 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.49□□□□□ -1.85
CCSER1Q9C0I3 AC104417.1-201ENST00000523974 751 ntBASIC3.49□□□□□ -1.85
CCSER1Q9C0I3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.49□□□□□ -1.85
CCSER1Q9C0I3 AC126365.2-201ENST00000580630 379 ntBASIC3.49□□□□□ -1.85
CCSER1Q9C0I3 AC012493.2-201ENST00000595083 291 ntBASIC3.49□□□□□ -1.85
CCSER1Q9C0I3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.49□□□□□ -1.85
CCSER1Q9C0I3 PRELID3BP8-201ENST00000604148 295 ntBASIC3.49□□□□□ -1.85
CCSER1Q9C0I3 AC011816.2-201ENST00000607089 556 ntBASIC3.49□□□□□ -1.85
CCSER1Q9C0I3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.49□□□□□ -1.85
CCSER1Q9C0I3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.49□□□□□ -1.85
CCSER1Q9C0I3 MIR8057-201ENST00000620957 69 ntBASIC3.49□□□□□ -1.85
CCSER1Q9C0I3 AL360181.4-201ENST00000621752 134 ntBASIC3.49□□□□□ -1.85
CCSER1Q9C0I3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.49□□□□□ -1.85
CCSER1Q9C0I3 AC087821.2-201ENST00000637086 450 ntBASIC3.49□□□□□ -1.85
CCSER1Q9C0I3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.49□□□□□ -1.85
CCSER1Q9C0I3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCSER1Q9C0I3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.49□□□□□ -1.85
CCSER1Q9C0I3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCSER1Q9C0I3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 AL049780.3-201ENST00000624612 1583 ntBASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 SNORD15B-201ENST00000384714 146 ntBASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 MIR491-201ENST00000384877 84 ntBASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 AC069282.1-201ENST00000411911 526 ntBASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 MTCO3P1-205ENST00000422088 832 ntBASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 HIGD1AP11-201ENST00000438361 280 ntBASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 AC006028.1-201ENST00000438379 402 ntBASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 MTND2P19-201ENST00000449129 1012 ntBASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 ARPC3P2-201ENST00000457786 533 ntBASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 DYNLL1P6-201ENST00000503440 264 ntBASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 SNORA70.24-201ENST00000517233 118 ntBASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 RN7SKP57-201ENST00000517248 293 ntBASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 AC018630.1-201ENST00000541376 925 ntBASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 EEF1B2P4-201ENST00000551398 348 ntBASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 UBL5P2-201ENST00000583788 219 ntBASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 BNIP3P27-201ENST00000599991 412 ntBASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 XIAPP1-201ENST00000603162 600 ntBASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 AC016877.3-201ENST00000606778 504 ntBASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 AC008083.4-201ENST00000615076 444 ntBASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.48□□□□□ -1.85
CCSER1Q9C0I3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 MIR217-201ENST00000384817 110 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 SNORA48.8-201ENST00000391324 134 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 RPL21P3-201ENST00000395517 478 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 RPL7P25-201ENST00000404151 721 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AL024507.1-201ENST00000412741 274 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AL136133.1-201ENST00000413694 376 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AC092634.6-201ENST00000418558 192 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AC027644.1-201ENST00000419595 298 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 DPRXP1-201ENST00000426312 460 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 Z93242.1-201ENST00000427102 353 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AL512649.1-201ENST00000428997 581 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 RPL31P54-201ENST00000429803 370 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AC016696.1-201ENST00000446949 318 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 MRPL42P4-201ENST00000453267 443 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AC146507.2-201ENST00000460608 476 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AP002884.2-201ENST00000471647 395 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 RN7SL504P-201ENST00000494496 287 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 MTND4LP22-201ENST00000508209 276 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AC008837.1-201ENST00000511513 412 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AC027309.2-201ENST00000520566 192 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 MIR4474-201ENST00000579189 78 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms