Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RNU6-798P-201ENST00000516912 103 ntBASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 RNA5SP454-201ENST00000517231 127 ntBASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 RN7SKP295-201ENST00000517264 153 ntBASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 OR5D15P-201ENST00000531671 942 ntBASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AL137161.1-201ENST00000532231 390 ntBASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AL627230.1-201ENST00000613077 211 ntBASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AC083806.3-201ENST00000614016 455 ntBASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 uc_338.7-201ENST00000621834 124 ntBASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AC022418.1-201ENST00000624118 445 ntBASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 AL442639.1-201ENST00000625030 1899 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 RPL32P3-201ENST00000359025 275 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 Y_RNA.212-201ENST00000364177 102 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 RNA5SP132-201ENST00000364725 118 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 RNU6-1318P-201ENST00000365389 103 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 Y_RNA.482-201ENST00000384377 111 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 MIR551A-201ENST00000385042 96 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 AL121834.1-202ENST00000404494 277 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 MIR1302-3-201ENST00000408128 138 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 OR3A2-201ENST00000408891 1076 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 Y_RNA.618-201ENST00000410949 107 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 RPL7AP49-201ENST00000429522 581 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 AL591438.1-201ENST00000433508 581 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 RPL19P16-201ENST00000433839 588 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 AL390119.1-201ENST00000440329 312 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 CYCSP51-201ENST00000443545 318 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 PPIAP3-201ENST00000450588 505 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 MRPS31P2-201ENST00000451581 518 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 YWHAEP1-201ENST00000453697 763 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 AL162395.1-201ENST00000457882 422 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 AC092754.1-201ENST00000472975 479 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 RN7SL629P-201ENST00000489622 285 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 RPS27P27-201ENST00000498779 255 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 AC002456.2-201ENST00000509356 380 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 RNU6-123P-201ENST00000516163 102 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 AC013244.1-201ENST00000604279 193 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 AC104695.2-201ENST00000605056 775 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 AL353662.3-201ENST00000625131 237 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 AL596275.2-204ENST00000641628 552 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 AL596275.2-206ENST00000641957 626 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 MTND4P1-201ENST00000457501 1466 ntBASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM56Q9BRZ2 AL359893.1-201ENST00000447628 1580 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 162.6 ms