Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 AL031779.1-201ENST00000415663 330 ntBASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 USP9YP14-201ENST00000430663 563 ntBASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 PTGES3P3-201ENST00000511479 482 ntBASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 RNU6-405P-201ENST00000516637 110 ntBASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 RNU6-714P-201ENST00000516963 103 ntBASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 AC022878.1-201ENST00000530684 149 ntBASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 AC022880.1-201ENST00000534017 973 ntBASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 AC107954.1-201ENST00000565906 727 ntBASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 AC091805.2-201ENST00000603848 235 ntBASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 AC112191.3-201ENST00000604371 277 ntBASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 AC008498.1-201ENST00000613012 531 ntBASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 AL596245.1-201ENST00000618994 362 ntBASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 AC091925.2-201ENST00000625059 256 ntBASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 AC092447.10-201ENST00000620607 1652 ntBASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 MTCO1P24-201ENST00000515438 1558 ntBASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AC092125.1-201ENST00000562568 1995 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 RNA5SP258-201ENST00000362750 119 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 RNA5SP97-201ENST00000365006 84 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 SNORD3H-201ENST00000384486 214 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 U3.29-201ENST00000391296 212 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 SNORA3C-201ENST00000408792 125 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 MTCO1P21-201ENST00000416634 589 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AIMP1P1-201ENST00000418670 937 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AL451062.2-201ENST00000427515 271 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 NANOGP6-201ENST00000429190 847 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 ELOCP18-201ENST00000434209 337 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 HMGB3P9-201ENST00000441799 583 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 ELOCP30-201ENST00000447108 299 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 PPIAP3-201ENST00000450588 505 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 RPS26P28-201ENST00000470806 348 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 NDUFB4P2-201ENST00000509515 391 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AC109464.2-201ENST00000510242 943 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 CDC42P4-201ENST00000510507 563 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AC093677.1-201ENST00000514414 678 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 RN7SKP298-201ENST00000515950 94 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 PDCD5P1-201ENST00000543528 309 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AC245505.1-201ENST00000556398 224 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 HMGB3P26-201ENST00000560051 582 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AL121834.1-201ENST00000572284 509 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AC233702.9-201ENST00000581528 203 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AC244505.7-201ENST00000599675 272 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AL359999.1-201ENST00000604513 294 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AC005332.10-201ENST00000612725 619 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 AC026368.1-201ENST00000614934 690 ntBASIC4.17□□□□□ -1.74
PAAF1Q9BRP4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms