Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX18Q96RF0 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX18Q96RF0 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SNX18Q96RF0 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.11□□□□□ -1.75
SNX18Q96RF0 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX18Q96RF0 DNAJC19P7-201ENST00000428811 344 ntBASIC4.11□□□□□ -1.75
SNX18Q96RF0 OR51AB1P-201ENST00000429046 620 ntBASIC4.11□□□□□ -1.75
SNX18Q96RF0 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.11□□□□□ -1.75
SNX18Q96RF0 OR2B7P-201ENST00000429302 934 ntBASIC4.11□□□□□ -1.75
SNX18Q96RF0 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.11□□□□□ -1.75
SNX18Q96RF0 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.11□□□□□ -1.75
SNX18Q96RF0 DPPA3P1-201ENST00000448050 469 ntBASIC4.11□□□□□ -1.75
SNX18Q96RF0 AL359385.1-201ENST00000456509 365 ntBASIC4.11□□□□□ -1.75
SNX18Q96RF0 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.11□□□□□ -1.75
SNX18Q96RF0 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SNX18Q96RF0 RN7SL481P-201ENST00000477764 299 ntBASIC4.11□□□□□ -1.75
SNX18Q96RF0 AC106872.2-201ENST00000494303 480 ntBASIC4.11□□□□□ -1.75
SNX18Q96RF0 AC114967.1-201ENST00000504890 259 ntBASIC4.11□□□□□ -1.75
SNX18Q96RF0 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX18Q96RF0 AC005798.1-201ENST00000513715 387 ntBASIC4.11□□□□□ -1.75
SNX18Q96RF0 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.11□□□□□ -1.75
SNX18Q96RF0 RN7SKP276-201ENST00000516242 268 ntBASIC4.11□□□□□ -1.75
SNX18Q96RF0 AC012417.1-201ENST00000582307 1039 ntBASIC4.11□□□□□ -1.75
SNX18Q96RF0 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.11□□□□□ -1.75
SNX18Q96RF0 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.11□□□□□ -1.75
SNX18Q96RF0 AC011468.4-201ENST00000603942 409 ntBASIC4.11□□□□□ -1.75
SNX18Q96RF0 AC008277.2-201ENST00000605196 797 ntBASIC4.11□□□□□ -1.75
SNX18Q96RF0 MIR98-201ENST00000606724 119 ntBASIC4.11□□□□□ -1.75
SNX18Q96RF0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SNX18Q96RF0 AL133173.2-201ENST00000614270 90 ntBASIC4.11□□□□□ -1.75
SNX18Q96RF0 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SNX18Q96RF0 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SNX18Q96RF0 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
SNX18Q96RF0 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.11□□□□□ -1.75
SNX18Q96RF0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SNX18Q96RF0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SNX18Q96RF0 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.1□□□□□ -1.75
SNX18Q96RF0 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SNX18Q96RF0 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
SNX18Q96RF0 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.1□□□□□ -1.75
SNX18Q96RF0 OR5J1P-201ENST00000313544 939 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 AC067945.1-201ENST00000342609 618 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 SNORA72.1-201ENST00000363485 129 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 Y_RNA.234-201ENST00000364409 97 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 RNU6-282P-201ENST00000365357 103 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 RNA5SP22-201ENST00000365393 109 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 RNU6-1103P-201ENST00000384150 107 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 RNU6-1207P-201ENST00000384343 107 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 MTND4LP20-201ENST00000402379 270 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SNX18Q96RF0 AC009237.5-201ENST00000414271 501 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.1□□□□□ -1.75
SNX18Q96RF0 CYP4F29P-201ENST00000420685 446 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX18Q96RF0 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.1□□□□□ -1.75
SNX18Q96RF0 AL353777.1-201ENST00000425552 326 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 AC133104.1-201ENST00000429100 218 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 RPL23AP25-201ENST00000430973 463 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 MTCO2P11-201ENST00000431069 680 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX18Q96RF0 AC112653.1-201ENST00000443851 386 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX18Q96RF0 MTND2P24-201ENST00000453434 806 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX18Q96RF0 AP1S2P1-201ENST00000457344 379 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX18Q96RF0 RPL37P6-202ENST00000464216 403 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 AC011005.3-201ENST00000491624 395 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
SNX18Q96RF0 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SNX18Q96RF0 AC098799.2-201ENST00000509466 868 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX18Q96RF0 RNU6-528P-201ENST00000516926 100 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 OR5BC1P-201ENST00000529327 739 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX18Q96RF0 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX18Q96RF0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SNX18Q96RF0 AC009101.1-201ENST00000568135 242 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX18Q96RF0 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SNX18Q96RF0 AC008745.1-201ENST00000604064 271 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.1□□□□□ -1.75
SNX18Q96RF0 AL031666.3-201ENST00000609320 1006 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 MIR6780A-201ENST00000615089 68 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 AL596245.1-201ENST00000618994 362 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 MIR7703-201ENST00000620784 77 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SNX18Q96RF0 MIR6810-201ENST00000622701 70 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 MIR7641-1-201ENST00000627518 61 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 MIR4496-201ENST00000635896 61 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.1□□□□□ -1.75
SNX18Q96RF0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SNX18Q96RF0 PNPT1P2-201ENST00000456768 2050 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 NOL8P1-201ENST00000508336 3529 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 ZNF734P-201ENST00000419494 1534 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 AC007390.2-201ENST00000606229 3803 ntBASIC4.1□□□□□ -1.75
SNX18Q96RF0 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
SNX18Q96RF0 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms