Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 RPSAP44-201ENST00000406712 884 ntBASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 AC074117.2-201ENST00000417130 397 ntBASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 RPL23AP95-201ENST00000426806 265 ntBASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 RN7SL751P-201ENST00000473281 284 ntBASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 AC009153.1-201ENST00000485799 496 ntBASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 AC097263.1-201ENST00000496795 606 ntBASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 UBE2CP3-201ENST00000502715 450 ntBASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 AC027801.3-201ENST00000515049 698 ntBASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 MIR5571-201ENST00000577998 113 ntBASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 AC131055.1-201ENST00000584626 316 ntBASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 AL356157.2-201ENST00000605122 111 ntBASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
MS4A3Q96HJ5 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.46□□□□□ -1.37
MS4A3Q96HJ5 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC6.46□□□□□ -1.37
MS4A3Q96HJ5 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.46□□□□□ -1.37
MS4A3Q96HJ5 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.46□□□□□ -1.37
MS4A3Q96HJ5 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.46□□□□□ -1.37
MS4A3Q96HJ5 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.46□□□□□ -1.37
MS4A3Q96HJ5 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
MS4A3Q96HJ5 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
MS4A3Q96HJ5 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.46□□□□□ -1.37
MS4A3Q96HJ5 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.46□□□□□ -1.37
MS4A3Q96HJ5 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 RN7SKP36-201ENST00000363997 312 ntBASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 AC007560.1-201ENST00000426912 237 ntBASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 LIN28AP2-201ENST00000445283 458 ntBASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 snoU109.2-201ENST00000459316 135 ntBASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 RN7SL189P-201ENST00000468631 289 ntBASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 AC084878.1-201ENST00000480555 648 ntBASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 AC008496.1-201ENST00000509131 295 ntBASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 MYL6-211ENST00000548580 528 ntTSL 2 BASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 AL049869.4-201ENST00000555669 178 ntBASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 AC140479.2-201ENST00000421567 3130 ntBASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 AC005261.2-201ENST00000593427 4258 ntBASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 AP000866.6-201ENST00000638898 3579 ntBASIC6.46□□□□□ -1.38
MS4A3Q96HJ5 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 AC022336.2-201ENST00000568966 2538 ntBASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 SNORD45.3-201ENST00000363836 72 ntBASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 RNA5SP125-201ENST00000364843 120 ntBASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 Y_RNA.368-201ENST00000365547 113 ntBASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 RNU6-144P-201ENST00000383951 107 ntBASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 RNU6-793P-201ENST00000384233 104 ntBASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 RNU6-72P-201ENST00000384285 79 ntBASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 Y_RNA.466-201ENST00000384294 113 ntBASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 RNA5SP56-201ENST00000410277 118 ntBASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 AL078601.1-201ENST00000444542 271 ntBASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 SS18L2P1-201ENST00000445923 213 ntBASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 BX276092.4-201ENST00000452056 248 ntBASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms