Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
TRIM11Q96F44 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM11Q96F44 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM11Q96F44 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM11Q96F44 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM11Q96F44 Y_RNA.150-201ENST00000363562 102 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 Y_RNA.270-201ENST00000364693 104 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 Y_RNA.485-201ENST00000384395 102 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 AL031985.1-201ENST00000392713 418 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 RNU6-1050P-201ENST00000410388 107 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 POLHP1-201ENST00000411806 470 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM11Q96F44 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM11Q96F44 GSTM5P1-201ENST00000434751 660 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM11Q96F44 AC073910.1-201ENST00000445047 438 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM11Q96F44 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM11Q96F44 PCMTD1P1-201ENST00000455560 355 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 AC007998.1-201ENST00000474156 672 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 RPL7AP10-201ENST00000481016 791 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 AC055855.1-201ENST00000489563 579 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 RN7SL591P-201ENST00000496150 292 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM11Q96F44 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM11Q96F44 AC016559.2-201ENST00000510759 359 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 RNU4-77P-201ENST00000516692 156 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 RNU6-255P-201ENST00000516957 105 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM11Q96F44 DEFB109D-201ENST00000529497 240 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 AC135001.1-201ENST00000544546 283 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM11Q96F44 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM11Q96F44 AC015720.2-201ENST00000567709 334 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM11Q96F44 AC011477.5-201ENST00000586571 259 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 AC068790.3-201ENST00000602988 553 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 AL512782.1-201ENST00000603093 364 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 SNORD58B-201ENST00000607313 66 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 AC244100.1-202ENST00000621554 382 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM11Q96F44 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM11Q96F44 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM11Q96F44 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
TRIM11Q96F44 HSPA8P18-201ENST00000439846 1928 ntBASIC5.7□□□□□ -1.5
TRIM11Q96F44 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM11Q96F44 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM11Q96F44 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM11Q96F44 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM11Q96F44 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM11Q96F44 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TRIM11Q96F44 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM11Q96F44 Y_RNA.39-201ENST00000362620 98 ntBASIC5.69□□□□□ -1.5
TRIM11Q96F44 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM11Q96F44 RNU6-1093P-201ENST00000391194 107 ntBASIC5.69□□□□□ -1.5
TRIM11Q96F44 RNU2-6P-201ENST00000411404 190 ntBASIC5.69□□□□□ -1.5
TRIM11Q96F44 SRSF1P1-201ENST00000424058 520 ntBASIC5.69□□□□□ -1.5
TRIM11Q96F44 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM11Q96F44 SUMO2P3-201ENST00000438311 288 ntBASIC5.69□□□□□ -1.5
TRIM11Q96F44 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM11Q96F44 AC114495.1-201ENST00000441274 436 ntBASIC5.69□□□□□ -1.5
TRIM11Q96F44 RPS10P18-201ENST00000442662 495 ntBASIC5.69□□□□□ -1.5
TRIM11Q96F44 GAPDHP25-201ENST00000447061 1001 ntBASIC5.69□□□□□ -1.5
TRIM11Q96F44 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM11Q96F44 RPS23P3-201ENST00000470993 430 ntBASIC5.69□□□□□ -1.5
TRIM11Q96F44 AC114801.2-201ENST00000503825 781 ntBASIC5.69□□□□□ -1.5
TRIM11Q96F44 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
TRIM11Q96F44 TXNP6-201ENST00000510190 310 ntBASIC5.69□□□□□ -1.5
TRIM11Q96F44 MTCO3P44-201ENST00000510977 541 ntBASIC5.69□□□□□ -1.5
TRIM11Q96F44 SNORD46.2-201ENST00000516021 102 ntBASIC5.69□□□□□ -1.5
TRIM11Q96F44 Y_RNA.670-201ENST00000516255 105 ntBASIC5.69□□□□□ -1.5
TRIM11Q96F44 Y_RNA.673-201ENST00000516306 88 ntBASIC5.69□□□□□ -1.5
TRIM11Q96F44 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM11Q96F44 AL137161.1-201ENST00000532231 390 ntBASIC5.69□□□□□ -1.5
TRIM11Q96F44 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.69□□□□□ -1.5
TRIM11Q96F44 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM11Q96F44 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM11Q96F44 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM11Q96F44 MIR5583-1-201ENST00000580941 59 ntBASIC5.69□□□□□ -1.5
TRIM11Q96F44 MIR4505-201ENST00000582238 73 ntBASIC5.69□□□□□ -1.5
TRIM11Q96F44 MIR3133-201ENST00000583157 78 ntBASIC5.69□□□□□ -1.5
TRIM11Q96F44 SNORD39.3-201ENST00000584451 71 ntBASIC5.69□□□□□ -1.5
TRIM11Q96F44 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM11Q96F44 AL512329.2-201ENST00000607350 548 ntBASIC5.69□□□□□ -1.5
TRIM11Q96F44 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM11Q96F44 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM11Q96F44 ATP5A1P2-202ENST00000616464 443 ntBASIC5.69□□□□□ -1.5
TRIM11Q96F44 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM11Q96F44 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM11Q96F44 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.69□□□□□ -1.5
TRIM11Q96F44 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM11Q96F44 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
TRIM11Q96F44 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM11Q96F44 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
TRIM11Q96F44 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM11Q96F44 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM11Q96F44 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM11Q96F44 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM11Q96F44 OR56A5-201ENST00000340110 738 ntBASIC5.68□□□□□ -1.5
TRIM11Q96F44 Y_RNA.276-201ENST00000364732 109 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms