Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.6□□□□□ -1.67
CHFRQ96EP1 BX890604.2-201ENST00000427883 474 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 GTF2IP20-201ENST00000431663 360 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CHFRQ96EP1 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.6□□□□□ -1.67
CHFRQ96EP1 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 AC002486.1-201ENST00000435098 391 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 AC009961.2-201ENST00000435771 251 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 RABEPKP1-201ENST00000440529 1026 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 MTCO3P20-201ENST00000454926 688 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 AL445433.1-201ENST00000457507 257 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 UQCRHP4-201ENST00000471686 272 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.6□□□□□ -1.67
CHFRQ96EP1 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.6□□□□□ -1.67
CHFRQ96EP1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.6□□□□□ -1.67
CHFRQ96EP1 AC026782.1-201ENST00000512952 449 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.6□□□□□ -1.67
CHFRQ96EP1 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.6□□□□□ -1.67
CHFRQ96EP1 AC243972.3-201ENST00000539655 198 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.6□□□□□ -1.67
CHFRQ96EP1 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.6□□□□□ -1.67
CHFRQ96EP1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.6□□□□□ -1.67
CHFRQ96EP1 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.6□□□□□ -1.67
CHFRQ96EP1 RN7SL176P-201ENST00000580352 264 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.6□□□□□ -1.67
CHFRQ96EP1 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.6□□□□□ -1.67
CHFRQ96EP1 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.6□□□□□ -1.67
CHFRQ96EP1 AC007687.1-201ENST00000602704 304 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 AL355598.1-201ENST00000604169 202 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 AC112191.3-201ENST00000604371 277 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 AL591034.3-201ENST00000605511 685 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 AC004908.2-201ENST00000609090 574 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 AC243756.2-201ENST00000618406 463 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.6□□□□□ -1.67
CHFRQ96EP1 AC093591.3-201ENST00000634516 308 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHFRQ96EP1 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.6□□□□□ -1.67
CHFRQ96EP1 GDI2P1-201ENST00000429312 1336 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CHFRQ96EP1 ZNF37BP-203ENST00000452306 1352 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHFRQ96EP1 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.6□□□□□ -1.67
CHFRQ96EP1 EIF2AP4-201ENST00000424793 1781 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHFRQ96EP1 AC007529.1-201ENST00000418574 2178 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHFRQ96EP1 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHFRQ96EP1 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CHFRQ96EP1 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHFRQ96EP1 HMGB1P5-201ENST00000255320 642 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 RNU6-451P-201ENST00000362921 107 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 RNU6-723P-201ENST00000383973 107 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 Y_RNA.422-201ENST00000384054 114 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 MIR559-201ENST00000385188 96 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 RPL23AP29-201ENST00000397284 453 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 AC025750.1-201ENST00000399891 379 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 AL603766.1-201ENST00000407763 664 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 RNA5SP239-201ENST00000410218 129 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 USP9YP16-201ENST00000430287 407 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 AC016691.1-201ENST00000441321 413 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 MTND6P13-201ENST00000443510 523 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 USP9YP23-201ENST00000455085 407 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 AC133473.1-201ENST00000455173 299 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 RNU6-420P-201ENST00000458780 107 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 AC130509.1-201ENST00000464158 433 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 ACTR3P3-201ENST00000480448 893 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 AC020890.1-201ENST00000491837 504 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 AC108078.3-201ENST00000502633 489 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CHFRQ96EP1 SNORA19.2-201ENST00000516013 114 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 RNU6-416P-201ENST00000516265 103 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHFRQ96EP1 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 AC022878.1-201ENST00000530684 149 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 DNAJC8P1-201ENST00000554535 372 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 LINC00622-201ENST00000562811 1570 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 AC243960.4-201ENST00000600532 288 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 AL390838.2-201ENST00000602394 274 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms