Protein–RNA interactions for Protein: Q8TEQ0

SNX29, Sorting nexin-29, humanhuman

Predictions only

Length 813 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29Q8TEQ0 RPL36AP13-201ENST00000457490 317 ntBASIC5.67□□□□□ -1.5
SNX29Q8TEQ0 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX29Q8TEQ0 AC021146.2-201ENST00000504736 556 ntBASIC5.67□□□□□ -1.5
SNX29Q8TEQ0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.67□□□□□ -1.5
SNX29Q8TEQ0 AC017037.2-201ENST00000513850 890 ntBASIC5.67□□□□□ -1.5
SNX29Q8TEQ0 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.67□□□□□ -1.5
SNX29Q8TEQ0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC5.67□□□□□ -1.5
SNX29Q8TEQ0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNX29Q8TEQ0 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.67□□□□□ -1.5
SNX29Q8TEQ0 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX29Q8TEQ0 CYP2C61P-201ENST00000604072 290 ntBASIC5.67□□□□□ -1.5
SNX29Q8TEQ0 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX29Q8TEQ0 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX29Q8TEQ0 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX29Q8TEQ0 Z95331.1-201ENST00000623075 23112 ntBASIC5.67□□□□□ -1.5
SNX29Q8TEQ0 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.67□□□□□ -1.5
SNX29Q8TEQ0 AC109780.1-201ENST00000451768 1344 ntBASIC5.67□□□□□ -1.5
SNX29Q8TEQ0 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX29Q8TEQ0 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNX29Q8TEQ0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNX29Q8TEQ0 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
SNX29Q8TEQ0 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 Y_RNA.167-201ENST00000363735 109 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 Y_RNA.197-201ENST00000364004 102 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 RNU6-188P-201ENST00000364207 107 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 SNORA70.10-201ENST00000384515 134 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 RNU4-34P-201ENST00000410431 124 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 DPPA2P3-201ENST00000411853 655 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 AL139396.1-201ENST00000421137 167 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 HMGN2P27-201ENST00000427352 270 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 AC005019.1-201ENST00000436455 431 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 RHOT1P3-201ENST00000436571 331 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 RPS29P9-201ENST00000440360 171 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 AC053481.1-201ENST00000467217 306 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 TRBVA-201ENST00000498804 316 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 AC004980.4-201ENST00000513375 203 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 RN7SKP24-201ENST00000515888 284 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 AC012339.2-201ENST00000523996 453 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 SNRPGP18-201ENST00000553000 214 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 AC100830.2-201ENST00000581636 240 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 MIR4660-201ENST00000583549 74 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 AC007566.2-201ENST00000603642 413 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 SDR42E1P1-201ENST00000611327 477 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 AP001486.3-201ENST00000615334 372 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 OR52H1-202ENST00000641796 1061 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 BDP1P-201ENST00000582658 1990 ntBASIC5.66□□□□□ -1.5
SNX29Q8TEQ0 AC133552.1-201ENST00000569988 4007 ntBASIC5.65□□□□□ -1.5
SNX29Q8TEQ0 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SNX29Q8TEQ0 AC008758.3-201ENST00000507003 1829 ntBASIC5.65□□□□□ -1.5
SNX29Q8TEQ0 ZNF734P-201ENST00000419494 1534 ntBASIC5.65□□□□□ -1.5
SNX29Q8TEQ0 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.65□□□□□ -1.5
SNX29Q8TEQ0 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.65□□□□□ -1.5
SNX29Q8TEQ0 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SNX29Q8TEQ0 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SNX29Q8TEQ0 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SNX29Q8TEQ0 Y_RNA.31-201ENST00000362574 102 ntBASIC5.65□□□□□ -1.5
SNX29Q8TEQ0 RNU6-1287P-201ENST00000362914 107 ntBASIC5.65□□□□□ -1.5
SNX29Q8TEQ0 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.65□□□□□ -1.5
SNX29Q8TEQ0 RNU6-432P-201ENST00000384196 109 ntBASIC5.65□□□□□ -1.5
SNX29Q8TEQ0 RNU6-463P-201ENST00000384340 107 ntBASIC5.65□□□□□ -1.5
SNX29Q8TEQ0 RNU6-1060P-201ENST00000384664 107 ntBASIC5.65□□□□□ -1.5
SNX29Q8TEQ0 MIR765-201ENST00000390226 114 ntBASIC5.65□□□□□ -1.5
SNX29Q8TEQ0 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SNX29Q8TEQ0 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.65□□□□□ -1.5
SNX29Q8TEQ0 RNA5SP107-201ENST00000411358 122 ntBASIC5.65□□□□□ -1.5
SNX29Q8TEQ0 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.65□□□□□ -1.5
SNX29Q8TEQ0 RPL31P2-201ENST00000413849 377 ntBASIC5.65□□□□□ -1.5
SNX29Q8TEQ0 AC113618.1-201ENST00000416747 285 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms