Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 RNU6-152P-201ENST00000384037 107 ntBASIC2.86□□□□□ -1.95
CCDC112Q8NEF3 RNU4-31P-201ENST00000384211 141 ntBASIC2.86□□□□□ -1.95
CCDC112Q8NEF3 RPS3AP26-201ENST00000398259 784 ntBASIC2.86□□□□□ -1.95
CCDC112Q8NEF3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC112Q8NEF3 RNU4-65P-201ENST00000410473 140 ntBASIC2.86□□□□□ -1.95
CCDC112Q8NEF3 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC112Q8NEF3 AL513175.1-201ENST00000431492 780 ntBASIC2.86□□□□□ -1.95
CCDC112Q8NEF3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC112Q8NEF3 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC112Q8NEF3 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC112Q8NEF3 AC090543.1-201ENST00000492168 485 ntBASIC2.86□□□□□ -1.95
CCDC112Q8NEF3 AC010486.1-201ENST00000511793 424 ntBASIC2.86□□□□□ -1.95
CCDC112Q8NEF3 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC112Q8NEF3 IGKV2D-36-201ENST00000518643 226 ntBASIC2.86□□□□□ -1.95
CCDC112Q8NEF3 AC007954.1-201ENST00000554198 494 ntBASIC2.86□□□□□ -1.95
CCDC112Q8NEF3 AC009268.1-201ENST00000561352 1203 ntBASIC2.86□□□□□ -1.95
CCDC112Q8NEF3 VN1R7P-201ENST00000619242 903 ntBASIC2.86□□□□□ -1.95
CCDC112Q8NEF3 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC112Q8NEF3 AC024023.1-201ENST00000624530 922 ntBASIC2.86□□□□□ -1.95
CCDC112Q8NEF3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC112Q8NEF3 AC004944.1-201ENST00000517807 3059 ntBASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 OR5J1P-201ENST00000313544 939 ntBASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 AL672167.1-206ENST00000356293 943 ntBASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 AL121972.1-201ENST00000402023 252 ntBASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 MIR1250-201ENST00000408098 113 ntBASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 RPLP0P7-201ENST00000416050 667 ntBASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 ATG3P1-201ENST00000419507 911 ntBASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 AL645937.1-202ENST00000421799 937 ntBASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 AL139132.1-201ENST00000431587 344 ntBASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 AC105272.1-201ENST00000438604 198 ntBASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 AC011816.1-201ENST00000441346 546 ntBASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 snoU13.3-201ENST00000459441 104 ntBASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 AC133134.1-201ENST00000466800 359 ntBASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 RPS23P3-201ENST00000470993 430 ntBASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 AC104687.1-201ENST00000485829 412 ntBASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 RNA5SP356-201ENST00000515972 94 ntBASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 AC022690.1-201ENST00000526681 550 ntBASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 AC087276.1-201ENST00000529659 480 ntBASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 OR4G1P-201ENST00000588632 938 ntBASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 RPL23AP78-201ENST00000599928 470 ntBASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 AL049779.4-201ENST00000604500 156 ntBASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC112Q8NEF3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CCDC112Q8NEF3 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CCDC112Q8NEF3 RNU6-1243P-201ENST00000364028 107 ntBASIC2.84□□□□□ -1.95
CCDC112Q8NEF3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC112Q8NEF3 AC000041.1-201ENST00000439655 175 ntBASIC2.84□□□□□ -1.95
CCDC112Q8NEF3 GAPDHP39-201ENST00000481866 979 ntBASIC2.84□□□□□ -1.95
CCDC112Q8NEF3 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC112Q8NEF3 SUMO1P1-201ENST00000497904 306 ntBASIC2.84□□□□□ -1.95
CCDC112Q8NEF3 AC111193.1-201ENST00000504097 155 ntBASIC2.84□□□□□ -1.95
CCDC112Q8NEF3 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC112Q8NEF3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC112Q8NEF3 RN7SKP283-201ENST00000517197 270 ntBASIC2.84□□□□□ -1.95
CCDC112Q8NEF3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC112Q8NEF3 AC103783.1-201ENST00000520506 373 ntBASIC2.84□□□□□ -1.95
CCDC112Q8NEF3 AC010306.1-201ENST00000523223 1117 ntBASIC2.84□□□□□ -1.95
CCDC112Q8NEF3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.84□□□□□ -1.95
CCDC112Q8NEF3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC112Q8NEF3 AC074029.2-201ENST00000551045 634 ntBASIC2.84□□□□□ -1.95
CCDC112Q8NEF3 AC125611.2-201ENST00000551907 647 ntBASIC2.84□□□□□ -1.95
CCDC112Q8NEF3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC112Q8NEF3 COX6CP3-201ENST00000580869 223 ntBASIC2.84□□□□□ -1.95
CCDC112Q8NEF3 DUXAP4-201ENST00000603046 613 ntBASIC2.84□□□□□ -1.95
CCDC112Q8NEF3 AL009028.1-201ENST00000604895 802 ntBASIC2.84□□□□□ -1.95
CCDC112Q8NEF3 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.84□□□□□ -1.95
CCDC112Q8NEF3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.96
CCDC112Q8NEF3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CCDC112Q8NEF3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 NSRP1P1-201ENST00000444067 1693 ntBASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 RNU6-819P-201ENST00000364116 107 ntBASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 AL138827.1-201ENST00000402666 306 ntBASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 RNA5SP21-201ENST00000410917 96 ntBASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 UBBP3-201ENST00000445497 241 ntBASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 AC073901.1-201ENST00000462471 408 ntBASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 AC004062.1-201ENST00000509926 645 ntBASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 SETP12-201ENST00000514068 805 ntBASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 SNORA31.1-201ENST00000515993 133 ntBASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 SNORA31.5-201ENST00000516190 133 ntBASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 COX6CP8-201ENST00000522620 226 ntBASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms