Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 OR2AS1P-201ENST00000427827 319 ntBASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 AC092393.1-201ENST00000439625 742 ntBASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 AC004022.1-201ENST00000447766 1066 ntBASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 Z99714.1-201ENST00000450463 807 ntBASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 RPS20P32-201ENST00000456044 356 ntBASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 snoU13.7-201ENST00000459220 104 ntBASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 AC023538.1-201ENST00000534576 736 ntBASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 CENPUP2-201ENST00000555897 1186 ntBASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 MTND4P33-201ENST00000556706 766 ntBASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 AC090888.2-201ENST00000559765 1144 ntBASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 AL845331.3-202ENST00000562856 261 ntBASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 MIR4504-201ENST00000577413 92 ntBASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 AC007349.4-201ENST00000608114 532 ntBASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 AC107075.1-201ENST00000613695 314 ntBASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 AC006065.5-201ENST00000623427 349 ntBASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 OR1S1-201ENST00000624470 978 ntBASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 ZNF826P-207ENST00000622273 1910 ntBASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 AC109315.1-201ENST00000584143 1347 ntBASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
LINC01555Q8NAE3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 AL035425.3-201ENST00000564206 4996 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 RNU6-657P-201ENST00000383904 107 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 RNU6-444P-201ENST00000383988 108 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 AL008987.1-201ENST00000415528 237 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 AC245054.2-201ENST00000415639 319 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 NUP35P2-201ENST00000416748 943 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 XKRYP1-201ENST00000423438 492 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 AL513175.1-201ENST00000431492 780 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 XKRYP2-201ENST00000432915 492 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 GTF2IP7-202ENST00000436677 309 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 MTND1P26-201ENST00000440488 538 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 RPL37P4-201ENST00000448908 268 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 AC011979.1-201ENST00000472300 483 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 RPS29P2-201ENST00000479278 136 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 AC011825.1-201ENST00000484967 388 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 AC093278.1-201ENST00000494700 600 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 AC114967.1-201ENST00000504890 259 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 RNA5SP135-201ENST00000517019 125 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 AC026407.1-201ENST00000518369 204 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 MIR5047-201ENST00000579212 100 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 VN1R78P-201ENST00000597393 564 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 AC022022.2-201ENST00000602989 360 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 AL355493.4-201ENST00000618530 292 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 AC018816.2-201ENST00000621460 353 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 AL157770.1-201ENST00000623049 439 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 AC090897.3-201ENST00000636973 1157 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 AC138649.5-201ENST00000637456 137 ntBASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01555Q8NAE3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.87□□□□□ -1.95
LINC01555Q8NAE3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.87□□□□□ -1.95
LINC01555Q8NAE3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
LINC01555Q8NAE3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LINC01555Q8NAE3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LINC01555Q8NAE3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms