Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS8Q8N3P4 Y_RNA.638-201ENST00000459374 113 ntBASIC3.16□□□□□ -1.9
VPS8Q8N3P4 RNU6-991P-201ENST00000516168 107 ntBASIC3.16□□□□□ -1.9
VPS8Q8N3P4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS8Q8N3P4 ZNF192P1-203ENST00000565888 810 ntBASIC3.16□□□□□ -1.9
VPS8Q8N3P4 Y_RNA.783-201ENST00000613546 102 ntBASIC3.16□□□□□ -1.9
VPS8Q8N3P4 MIR4278-201ENST00000636094 69 ntBASIC3.16□□□□□ -1.9
VPS8Q8N3P4 AC012321.1-201ENST00000561622 1588 ntBASIC3.16□□□□□ -1.9
VPS8Q8N3P4 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
VPS8Q8N3P4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
VPS8Q8N3P4 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.15□□□□□ -1.9
VPS8Q8N3P4 RNA5SP338-201ENST00000410495 85 ntBASIC3.15□□□□□ -1.91
VPS8Q8N3P4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.15□□□□□ -1.91
VPS8Q8N3P4 AC004866.2-201ENST00000438285 481 ntBASIC3.15□□□□□ -1.91
VPS8Q8N3P4 AL603825.1-201ENST00000438481 80 ntBASIC3.15□□□□□ -1.91
VPS8Q8N3P4 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.15□□□□□ -1.91
VPS8Q8N3P4 HMGB3P15-201ENST00000507326 574 ntBASIC3.15□□□□□ -1.91
VPS8Q8N3P4 FAM92A1P1-201ENST00000528023 890 ntBASIC3.15□□□□□ -1.91
VPS8Q8N3P4 AC022884.3-201ENST00000579571 248 ntBASIC3.15□□□□□ -1.91
VPS8Q8N3P4 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS8Q8N3P4 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS8Q8N3P4 VIS1.1-201ENST00000610517 203 ntBASIC3.15□□□□□ -1.91
VPS8Q8N3P4 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.15□□□□□ -1.91
VPS8Q8N3P4 AC048347.1-201ENST00000624621 427 ntBASIC3.15□□□□□ -1.91
VPS8Q8N3P4 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS8Q8N3P4 AC005336.3-201ENST00000623833 2679 ntBASIC3.15□□□□□ -1.91
VPS8Q8N3P4 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
VPS8Q8N3P4 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VPS8Q8N3P4 AC010680.1-201ENST00000590024 3590 ntBASIC3.15□□□□□ -1.91
VPS8Q8N3P4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VPS8Q8N3P4 AL096701.2-201ENST00000416920 238 ntBASIC3.14□□□□□ -1.91
VPS8Q8N3P4 AL513477.1-202ENST00000417061 214 ntBASIC3.14□□□□□ -1.91
VPS8Q8N3P4 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS8Q8N3P4 PTGES3P5-201ENST00000455109 434 ntBASIC3.14□□□□□ -1.91
VPS8Q8N3P4 AC078918.1-201ENST00000498515 228 ntBASIC3.14□□□□□ -1.91
VPS8Q8N3P4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS8Q8N3P4 PRELID2P1-201ENST00000552837 301 ntBASIC3.14□□□□□ -1.91
VPS8Q8N3P4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS8Q8N3P4 AL512646.1-201ENST00000269395 1077 ntBASIC3.13□□□□□ -1.91
VPS8Q8N3P4 RNA5SP160-201ENST00000364866 120 ntBASIC3.13□□□□□ -1.91
VPS8Q8N3P4 SNORA80E-201ENST00000384744 137 ntBASIC3.13□□□□□ -1.91
VPS8Q8N3P4 U8.13-201ENST00000390842 128 ntBASIC3.13□□□□□ -1.91
VPS8Q8N3P4 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.13□□□□□ -1.91
VPS8Q8N3P4 AL157827.1-201ENST00000447622 132 ntBASIC3.13□□□□□ -1.91
VPS8Q8N3P4 RNU6-717P-201ENST00000459076 104 ntBASIC3.13□□□□□ -1.91
VPS8Q8N3P4 SNORD108-201ENST00000459332 71 ntBASIC3.13□□□□□ -1.91
VPS8Q8N3P4 RPL7P5-201ENST00000471472 736 ntBASIC3.13□□□□□ -1.91
VPS8Q8N3P4 TRBV1-201ENST00000476502 284 ntBASIC3.13□□□□□ -1.91
VPS8Q8N3P4 RPL21P99-201ENST00000480369 423 ntBASIC3.13□□□□□ -1.91
VPS8Q8N3P4 GTF2IP9-201ENST00000502460 301 ntBASIC3.13□□□□□ -1.91
VPS8Q8N3P4 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS8Q8N3P4 DEFB122-202ENST00000569013 197 ntBASIC3.13□□□□□ -1.91
VPS8Q8N3P4 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.13□□□□□ -1.91
VPS8Q8N3P4 AC011468.4-201ENST00000603942 409 ntBASIC3.13□□□□□ -1.91
VPS8Q8N3P4 AC004241.3-201ENST00000611728 517 ntBASIC3.13□□□□□ -1.91
VPS8Q8N3P4 MIR6845-201ENST00000613182 61 ntBASIC3.13□□□□□ -1.91
VPS8Q8N3P4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
VPS8Q8N3P4 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.13□□□□□ -1.91
VPS8Q8N3P4 AL139811.1-201ENST00000424779 2299 ntBASIC3.13□□□□□ -1.91
VPS8Q8N3P4 CKAP2P1-201ENST00000555477 2049 ntBASIC3.13□□□□□ -1.91
VPS8Q8N3P4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
VPS8Q8N3P4 MIRLET7G-201ENST00000362280 84 ntBASIC3.12□□□□□ -1.91
VPS8Q8N3P4 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS8Q8N3P4 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.12□□□□□ -1.91
VPS8Q8N3P4 MTND2P16-201ENST00000419987 799 ntBASIC3.12□□□□□ -1.91
VPS8Q8N3P4 RPL38P4-201ENST00000502376 214 ntBASIC3.12□□□□□ -1.91
VPS8Q8N3P4 AC009977.1-201ENST00000586015 570 ntBASIC3.12□□□□□ -1.91
VPS8Q8N3P4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
VPS8Q8N3P4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.12□□□□□ -1.91
VPS8Q8N3P4 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS8Q8N3P4 AP001521.1-201ENST00000609150 300 ntBASIC3.12□□□□□ -1.91
VPS8Q8N3P4 AC123768.4-201ENST00000616244 701 ntBASIC3.12□□□□□ -1.91
VPS8Q8N3P4 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.12□□□□□ -1.91
VPS8Q8N3P4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS8Q8N3P4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS8Q8N3P4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.12□□□□□ -1.91
VPS8Q8N3P4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS8Q8N3P4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VPS8Q8N3P4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.11□□□□□ -1.91
VPS8Q8N3P4 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
VPS8Q8N3P4 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS8Q8N3P4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS8Q8N3P4 AL021397.1-201ENST00000451806 248 ntBASIC3.11□□□□□ -1.91
VPS8Q8N3P4 AC025033.1-201ENST00000463883 194 ntBASIC3.11□□□□□ -1.91
VPS8Q8N3P4 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.11□□□□□ -1.91
VPS8Q8N3P4 AP004242.1-201ENST00000533701 349 ntBASIC3.11□□□□□ -1.91
VPS8Q8N3P4 AC006270.2-201ENST00000578523 652 ntBASIC3.11□□□□□ -1.91
VPS8Q8N3P4 MIR5089-201ENST00000580047 84 ntBASIC3.11□□□□□ -1.91
VPS8Q8N3P4 AC009314.1-201ENST00000603871 304 ntBASIC3.11□□□□□ -1.91
VPS8Q8N3P4 BNIP3P10-201ENST00000605360 577 ntBASIC3.11□□□□□ -1.91
VPS8Q8N3P4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS8Q8N3P4 AC068722.2-201ENST00000618734 544 ntBASIC3.11□□□□□ -1.91
VPS8Q8N3P4 AC099063.3-201ENST00000642066 185 ntBASIC3.11□□□□□ -1.91
VPS8Q8N3P4 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.11□□□□□ -1.91
VPS8Q8N3P4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
VPS8Q8N3P4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VPS8Q8N3P4 HSPE1P26-201ENST00000405341 275 ntBASIC3.1□□□□□ -1.91
VPS8Q8N3P4 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
VPS8Q8N3P4 MTND4LP22-201ENST00000508209 276 ntBASIC3.1□□□□□ -1.91
VPS8Q8N3P4 AC010265.1-201ENST00000513509 211 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms