Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 CTSLP2-204ENST00000629029 392 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
COL27A1Q8IZC6 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
COL27A1Q8IZC6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.53□□□□□ -2
COL27A1Q8IZC6 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC2.53□□□□□ -2
COL27A1Q8IZC6 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
COL27A1Q8IZC6 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
COL27A1Q8IZC6 MAPK10-322ENST00000641485 4530 ntBASIC2.53□□□□□ -2
COL27A1Q8IZC6 AC016717.2-201ENST00000609089 5141 ntBASIC2.53□□□□□ -2
COL27A1Q8IZC6 AC008725.1-201ENST00000605123 2263 ntBASIC2.53□□□□□ -2
COL27A1Q8IZC6 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
COL27A1Q8IZC6 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.53□□□□□ -2
COL27A1Q8IZC6 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.53□□□□□ -2
COL27A1Q8IZC6 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.53□□□□□ -2
COL27A1Q8IZC6 MIR3074-201ENST00000384885 81 ntBASIC2.53□□□□□ -2
COL27A1Q8IZC6 AC069218.2-201ENST00000411665 344 ntBASIC2.53□□□□□ -2
COL27A1Q8IZC6 NPM1P11-201ENST00000417106 855 ntBASIC2.53□□□□□ -2
COL27A1Q8IZC6 RPL7P10-201ENST00000417407 739 ntBASIC2.53□□□□□ -2
COL27A1Q8IZC6 AC003685.2-201ENST00000422795 395 ntBASIC2.53□□□□□ -2
COL27A1Q8IZC6 OR51AB1P-201ENST00000429046 620 ntBASIC2.53□□□□□ -2
COL27A1Q8IZC6 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.53□□□□□ -2
COL27A1Q8IZC6 AC004865.1-201ENST00000442276 1003 ntBASIC2.53□□□□□ -2
COL27A1Q8IZC6 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.53□□□□□ -2
COL27A1Q8IZC6 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
COL27A1Q8IZC6 SNRPGP5-201ENST00000456003 220 ntBASIC2.53□□□□□ -2
COL27A1Q8IZC6 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.53□□□□□ -2
COL27A1Q8IZC6 PRELID3BP7-201ENST00000503606 469 ntBASIC2.53□□□□□ -2
COL27A1Q8IZC6 AC093752.1-206ENST00000511823 336 ntBASIC2.53□□□□□ -2
COL27A1Q8IZC6 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.53□□□□□ -2
COL27A1Q8IZC6 RPL7P20-201ENST00000520308 745 ntBASIC2.53□□□□□ -2
COL27A1Q8IZC6 AC019227.1-201ENST00000526902 510 ntBASIC2.53□□□□□ -2
COL27A1Q8IZC6 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.53□□□□□ -2
COL27A1Q8IZC6 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.53□□□□□ -2
COL27A1Q8IZC6 AL445435.1-201ENST00000604232 665 ntBASIC2.53□□□□□ -2
COL27A1Q8IZC6 AL158050.2-201ENST00000605336 568 ntBASIC2.53□□□□□ -2
COL27A1Q8IZC6 AC005046.1-201ENST00000608515 625 ntBASIC2.53□□□□□ -2
COL27A1Q8IZC6 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.53□□□□□ -2
COL27A1Q8IZC6 AC084824.4-201ENST00000620106 731 ntBASIC2.53□□□□□ -2
COL27A1Q8IZC6 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.53□□□□□ -2
COL27A1Q8IZC6 AC109454.4-201ENST00000623411 649 ntBASIC2.53□□□□□ -2
COL27A1Q8IZC6 OR1S1-201ENST00000624470 978 ntBASIC2.53□□□□□ -2
COL27A1Q8IZC6 AC126544.2-201ENST00000625174 749 ntBASIC2.53□□□□□ -2
COL27A1Q8IZC6 AC116096.1-201ENST00000566804 2314 ntBASIC2.53□□□□□ -2
COL27A1Q8IZC6 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC2.53□□□□□ -2
COL27A1Q8IZC6 DCAF13P3-201ENST00000561147 1334 ntBASIC2.53□□□□□ -2.01
COL27A1Q8IZC6 RNA5SP391-201ENST00000363456 119 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 SNORA51.12-201ENST00000384448 134 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 MIR518C-201ENST00000384822 101 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 RPS4XP7-201ENST00000406274 780 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AL354692.1-201ENST00000423044 315 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AL513124.1-201ENST00000450410 614 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 RPS20P32-201ENST00000456044 356 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 RN7SL75P-201ENST00000461926 281 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 MTATP6P9-201ENST00000515039 680 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 RNU6-1028P-201ENST00000517164 93 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AL139286.1-201ENST00000604465 483 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AC022306.3-201ENST00000619930 550 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AC009039.2-201ENST00000624524 529 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 MIR887-201ENST00000401258 79 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 RPL7P27-201ENST00000403775 720 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 MIR1250-201ENST00000408098 113 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AC106883.1-201ENST00000418805 562 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 MTCO1P39-201ENST00000426148 480 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AC010095.1-201ENST00000443543 144 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 MTATP6P14-201ENST00000455189 673 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 RPL21P71-201ENST00000465598 459 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 DYNLL1P6-201ENST00000503440 264 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AC008413.1-201ENST00000511864 177 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AC096725.1-201ENST00000514266 313 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AC112198.4-201ENST00000515450 351 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 RNU6-416P-201ENST00000516265 103 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AC104417.1-201ENST00000523974 751 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms