Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC020910.2-201ENST00000603635 610 ntBASIC4.76□□□□□ -1.65
TRIM48Q8IWZ4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM48Q8IWZ4 LARP1BP1-201ENST00000506036 1359 ntBASIC4.76□□□□□ -1.65
TRIM48Q8IWZ4 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 RNA5SP191-201ENST00000362585 102 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 RNU4-20P-201ENST00000365601 151 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 U3.29-201ENST00000391296 212 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AL357515.1-201ENST00000402967 542 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 MIR1271-201ENST00000408537 86 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 RNU2-62P-201ENST00000410868 191 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AC104333.2-201ENST00000422630 192 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AC018630.2-202ENST00000422992 927 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 OR2AH1P-201ENST00000425717 928 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AURKAPS2-201ENST00000454983 333 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 RPL23AP56-201ENST00000460778 453 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 MRPS17P3-201ENST00000465453 385 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AC007686.1-201ENST00000488511 463 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 MTCO3P44-201ENST00000510977 541 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 OR7H2P-201ENST00000513483 306 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 Y_RNA.719-201ENST00000517156 106 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 HMGB1P41-201ENST00000520234 440 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AL133271.1-201ENST00000538229 291 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AP001880.2-201ENST00000538233 448 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AC026464.5-201ENST00000562497 722 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 SNORA74C-1-201ENST00000580726 201 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 RN7SL435P-201ENST00000584418 282 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AC104687.2-201ENST00000604442 342 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 Y_RNA.812-201ENST00000610788 101 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AL161616.1-201ENST00000611867 286 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 Y_RNA.784-201ENST00000613803 101 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 Y_RNA.787-201ENST00000616522 101 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 Y_RNA.780-201ENST00000617336 101 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 Y_RNA.801-201ENST00000619005 101 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AC079684.1-201ENST00000621405 437 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AC015871.5-202ENST00000623252 701 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AL136313.1-201ENST00000624804 202 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 CR381572.2-201ENST00000624852 397 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 AC091925.2-201ENST00000625059 256 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 Z95327.2-201ENST00000414579 1873 ntBASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
TRIM48Q8IWZ4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 AC083843.3-201ENST00000623679 2186 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 RN7SKP115-201ENST00000363177 317 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 SNORA62.1-201ENST00000364287 154 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 U3.11-201ENST00000364476 212 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 Y_RNA.326-201ENST00000365176 113 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 RNU6-278P-201ENST00000390945 109 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 ENSAP1-201ENST00000392855 326 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 AL583835.1-201ENST00000399570 407 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 AL359643.1-201ENST00000404109 423 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 RAB28P1-201ENST00000411517 641 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 AC009302.1-201ENST00000417147 390 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 AC108059.3-201ENST00000456388 214 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 PPIAP21-201ENST00000464473 501 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 RPS20P21-201ENST00000466859 343 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 AC006967.1-201ENST00000467608 589 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 AC068305.1-201ENST00000497406 726 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 AL671862.1-201ENST00000515851 349 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 RNU4-29P-201ENST00000515943 174 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 RNU6-27P-201ENST00000516146 107 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms