Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 DYNLL1P4-201ENST00000549314 266 ntBASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 AC026371.1-201ENST00000551867 419 ntBASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 AC011494.1-201ENST00000596454 237 ntBASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 AC009570.1-201ENST00000609599 745 ntBASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 ADAM24P-201ENST00000398655 2101 ntBASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 EXOC5P1-201ENST00000510543 1969 ntBASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 AC109446.4-201ENST00000623235 2755 ntBASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 AC104964.3-201ENST00000606115 2860 ntBASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 SOCS5P3-201ENST00000425115 1576 ntBASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 RNU6-774P-201ENST00000363238 107 ntBASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 Y_RNA.314-201ENST00000365114 102 ntBASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 Y_RNA.477-201ENST00000384352 108 ntBASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 SNORA41-201ENST00000384675 132 ntBASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 RNU2-15P-201ENST00000410692 191 ntBASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 AL137014.1-201ENST00000420490 1226 ntBASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 AC007161.1-204ENST00000423039 460 ntBASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 RPL21P112-201ENST00000434403 463 ntBASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 AC105399.1-202ENST00000447303 205 ntBASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 AC009220.1-201ENST00000451614 275 ntBASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 RNU7-167P-201ENST00000459160 62 ntBASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 OR51K1P-201ENST00000510214 950 ntBASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 AC008162.1-201ENST00000604718 254 ntBASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 AL670379.4-201ENST00000605279 254 ntBASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 AL022394.1-201ENST00000606979 292 ntBASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 AC000068.2-201ENST00000608816 460 ntBASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SH3RF1Q7Z6J0 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
SH3RF1Q7Z6J0 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 RNU6-770P-201ENST00000363929 105 ntBASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 Y_RNA.399-201ENST00000383955 105 ntBASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 RNU6-306P-201ENST00000384617 107 ntBASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 AL133482.1-201ENST00000415988 498 ntBASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 RPL7P37-201ENST00000425095 738 ntBASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 PIGPP3-201ENST00000425307 415 ntBASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 RPL21P91-201ENST00000429231 479 ntBASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 USP9YP30-201ENST00000430729 455 ntBASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 RPS17P8-201ENST00000434525 335 ntBASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 AL590664.1-201ENST00000448065 339 ntBASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 MED28P2-201ENST00000475771 317 ntBASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 AC096745.1-201ENST00000509945 370 ntBASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 AC091912.1-201ENST00000511351 248 ntBASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 RNU6-138P-201ENST00000515952 107 ntBASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 IL7-206ENST00000520269 456 ntTSL 3 BASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 HSPE1P20-201ENST00000538133 289 ntBASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 AL731566.2-201ENST00000618971 317 ntBASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SH3RF1Q7Z6J0 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms