Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD109Q6YHK3 MIR21-201ENST00000362134 72 ntBASIC3.3□□□□□ -1.88
CD109Q6YHK3 RN7SKP226-201ENST00000364912 300 ntBASIC3.3□□□□□ -1.88
CD109Q6YHK3 Y_RNA.466-201ENST00000384294 113 ntBASIC3.3□□□□□ -1.88
CD109Q6YHK3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
CD109Q6YHK3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.3□□□□□ -1.88
CD109Q6YHK3 AL138785.1-201ENST00000425821 331 ntBASIC3.3□□□□□ -1.88
CD109Q6YHK3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.3□□□□□ -1.88
CD109Q6YHK3 CFTRP1-201ENST00000456646 183 ntBASIC3.3□□□□□ -1.88
CD109Q6YHK3 OR52A4P-203ENST00000498233 1014 ntBASIC3.3□□□□□ -1.88
CD109Q6YHK3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.3□□□□□ -1.88
CD109Q6YHK3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.3□□□□□ -1.88
CD109Q6YHK3 MIR4458-201ENST00000578872 75 ntBASIC3.3□□□□□ -1.88
CD109Q6YHK3 VN1R80P-201ENST00000597126 338 ntBASIC3.3□□□□□ -1.88
CD109Q6YHK3 AP004372.1-201ENST00000604842 844 ntBASIC3.3□□□□□ -1.88
CD109Q6YHK3 MIR6132-201ENST00000622083 109 ntBASIC3.3□□□□□ -1.88
CD109Q6YHK3 AC002064.3-201ENST00000623448 346 ntBASIC3.3□□□□□ -1.88
CD109Q6YHK3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.3□□□□□ -1.88
CD109Q6YHK3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.3□□□□□ -1.88
CD109Q6YHK3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.3□□□□□ -1.88
CD109Q6YHK3 U3.15-201ENST00000365398 212 ntBASIC3.29□□□□□ -1.88
CD109Q6YHK3 MIR124-3-201ENST00000384866 87 ntBASIC3.29□□□□□ -1.88
CD109Q6YHK3 MIR499A-201ENST00000384903 122 ntBASIC3.29□□□□□ -1.88
CD109Q6YHK3 MIR489-201ENST00000384923 84 ntBASIC3.29□□□□□ -1.88
CD109Q6YHK3 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.29□□□□□ -1.88
CD109Q6YHK3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.29□□□□□ -1.88
CD109Q6YHK3 OR4K11P-201ENST00000431829 904 ntBASIC3.29□□□□□ -1.88
CD109Q6YHK3 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.29□□□□□ -1.88
CD109Q6YHK3 MUPP-201ENST00000438111 566 ntBASIC3.29□□□□□ -1.88
CD109Q6YHK3 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.29□□□□□ -1.88
CD109Q6YHK3 GSTA11P-201ENST00000452866 669 ntBASIC3.29□□□□□ -1.88
CD109Q6YHK3 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.29□□□□□ -1.88
CD109Q6YHK3 OR8X1P-201ENST00000534542 869 ntBASIC3.29□□□□□ -1.88
CD109Q6YHK3 AC008083.2-201ENST00000546707 476 ntBASIC3.29□□□□□ -1.88
CD109Q6YHK3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.29□□□□□ -1.88
CD109Q6YHK3 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.29□□□□□ -1.88
CD109Q6YHK3 OR4H12P-201ENST00000556269 907 ntBASIC3.29□□□□□ -1.88
CD109Q6YHK3 AC015849.6-201ENST00000605454 474 ntBASIC3.29□□□□□ -1.88
CD109Q6YHK3 AP005901.5-201ENST00000545779 1796 ntBASIC3.29□□□□□ -1.88
CD109Q6YHK3 AC008432.1-201ENST00000615912 1320 ntBASIC3.29□□□□□ -1.88
CD109Q6YHK3 AC092326.2-201ENST00000624772 1561 ntBASIC3.29□□□□□ -1.88
CD109Q6YHK3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CD109Q6YHK3 RNU4-7P-201ENST00000364758 141 ntBASIC3.28□□□□□ -1.88
CD109Q6YHK3 MIR142-201ENST00000384835 87 ntBASIC3.28□□□□□ -1.88
CD109Q6YHK3 AC073464.3-201ENST00000422564 712 ntBASIC3.28□□□□□ -1.88
CD109Q6YHK3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.28□□□□□ -1.88
CD109Q6YHK3 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.28□□□□□ -1.88
CD109Q6YHK3 AC126177.3-201ENST00000551839 688 ntBASIC3.28□□□□□ -1.88
CD109Q6YHK3 AL451074.6-201ENST00000608512 729 ntBASIC3.28□□□□□ -1.88
CD109Q6YHK3 AC099778.2-201ENST00000610904 211 ntBASIC3.28□□□□□ -1.88
CD109Q6YHK3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CD109Q6YHK3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CD109Q6YHK3 AC005539.1-201ENST00000443768 1479 ntBASIC3.28□□□□□ -1.88
CD109Q6YHK3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CD109Q6YHK3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.27□□□□□ -1.89
CD109Q6YHK3 FGF7P8-201ENST00000402994 292 ntBASIC3.27□□□□□ -1.89
CD109Q6YHK3 RN7SKP123-201ENST00000410732 291 ntBASIC3.27□□□□□ -1.89
CD109Q6YHK3 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.27□□□□□ -1.89
CD109Q6YHK3 AC011753.1-201ENST00000451001 220 ntBASIC3.27□□□□□ -1.89
CD109Q6YHK3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.27□□□□□ -1.89
CD109Q6YHK3 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CD109Q6YHK3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.27□□□□□ -1.89
CD109Q6YHK3 AC078814.3-201ENST00000553036 491 ntBASIC3.27□□□□□ -1.89
CD109Q6YHK3 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.27□□□□□ -1.89
CD109Q6YHK3 MIR4506-201ENST00000584693 77 ntBASIC3.27□□□□□ -1.89
CD109Q6YHK3 VN1R84P-201ENST00000593697 235 ntBASIC3.27□□□□□ -1.89
CD109Q6YHK3 AC096586.2-201ENST00000610260 441 ntBASIC3.27□□□□□ -1.89
CD109Q6YHK3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
CD109Q6YHK3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CD109Q6YHK3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CD109Q6YHK3 MIR378A-201ENST00000362177 66 ntBASIC3.27□□□□□ -1.89
CD109Q6YHK3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.27□□□□□ -1.89
CD109Q6YHK3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.27□□□□□ -1.89
CD109Q6YHK3 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.27□□□□□ -1.89
CD109Q6YHK3 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.27□□□□□ -1.89
CD109Q6YHK3 RNA5SP385-201ENST00000515947 110 ntBASIC3.27□□□□□ -1.89
CD109Q6YHK3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.27□□□□□ -1.89
CD109Q6YHK3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.27□□□□□ -1.89
CD109Q6YHK3 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.27□□□□□ -1.89
CD109Q6YHK3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.27□□□□□ -1.89
CD109Q6YHK3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.27□□□□□ -1.89
CD109Q6YHK3 AL670379.6-201ENST00000603753 252 ntBASIC3.27□□□□□ -1.89
CD109Q6YHK3 AL670379.11-201ENST00000604059 253 ntBASIC3.27□□□□□ -1.89
CD109Q6YHK3 AL670379.10-201ENST00000604330 253 ntBASIC3.27□□□□□ -1.89
CD109Q6YHK3 AC008162.1-201ENST00000604718 254 ntBASIC3.27□□□□□ -1.89
CD109Q6YHK3 AL670379.1-201ENST00000604752 252 ntBASIC3.27□□□□□ -1.89
CD109Q6YHK3 AL670379.2-201ENST00000604983 252 ntBASIC3.27□□□□□ -1.89
CD109Q6YHK3 AL670379.5-201ENST00000605253 252 ntBASIC3.27□□□□□ -1.89
CD109Q6YHK3 AL670379.4-201ENST00000605279 254 ntBASIC3.27□□□□□ -1.89
CD109Q6YHK3 AL670379.12-201ENST00000605291 253 ntBASIC3.27□□□□□ -1.89
CD109Q6YHK3 AL670379.8-201ENST00000605353 252 ntBASIC3.27□□□□□ -1.89
CD109Q6YHK3 AL670379.9-201ENST00000605428 253 ntBASIC3.27□□□□□ -1.89
CD109Q6YHK3 AL670379.7-201ENST00000605823 252 ntBASIC3.27□□□□□ -1.89
CD109Q6YHK3 AC002076.2-201ENST00000617362 122 ntBASIC3.27□□□□□ -1.89
CD109Q6YHK3 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.27□□□□□ -1.89
CD109Q6YHK3 AC093591.3-201ENST00000634516 308 ntBASIC3.27□□□□□ -1.89
CD109Q6YHK3 AL139811.1-201ENST00000424779 2299 ntBASIC3.26□□□□□ -1.89
CD109Q6YHK3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CD109Q6YHK3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CD109Q6YHK3 AP001486.2-201ENST00000561652 5113 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms