Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 PLGLA-201ENST00000465668 449 ntBASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 RN7SL303P-201ENST00000469773 251 ntBASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 AC015795.1-201ENST00000513669 327 ntBASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 RNU6-1314P-201ENST00000517139 104 ntBASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 AC107953.1-201ENST00000522216 297 ntBASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 SUB1P1-201ENST00000524415 382 ntBASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 AC011979.2-201ENST00000527568 352 ntBASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 PSMA3P-201ENST00000555485 635 ntBASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 AC106785.1-201ENST00000565935 262 ntBASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 AC018552.3-201ENST00000567416 561 ntBASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 AL365204.3-201ENST00000612448 685 ntBASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 AL445567.2-201ENST00000618935 498 ntBASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 SAGE4P-201ENST00000442271 3381 ntBASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 AP001284.1-201ENST00000528393 2118 ntBASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 A2MP1-204ENST00000566278 4130 ntBASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 Y_RNA.100-201ENST00000363141 102 ntBASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 Y_RNA.419-201ENST00000384041 102 ntBASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 SNORA70C-201ENST00000384538 135 ntBASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 AL591416.1-201ENST00000404015 867 ntBASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 REREP1Y-201ENST00000422655 198 ntBASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 AL353729.1-201ENST00000425044 720 ntBASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 RPS29P17-201ENST00000430795 166 ntBASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 REREP2Y-201ENST00000439103 200 ntBASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 HMGN2P26-201ENST00000463169 339 ntBASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 AC096576.1-201ENST00000489014 359 ntBASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 RPL21P12-201ENST00000559810 515 ntBASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 AC060771.1-201ENST00000582031 164 ntBASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 AL022345.1-201ENST00000607292 135 ntBASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 AL603758.1-201ENST00000618654 241 ntBASIC5.9□□□□□ -1.46
USPL1Q5W0Q7 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.9□□□□□ -1.47
USPL1Q5W0Q7 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.47
USPL1Q5W0Q7 ELL2P4-201ENST00000446870 1376 ntBASIC5.9□□□□□ -1.47
USPL1Q5W0Q7 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
USPL1Q5W0Q7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.9□□□□□ -1.47
USPL1Q5W0Q7 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 AC027228.2-201ENST00000567141 2154 ntBASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 RNU6-1243P-201ENST00000364028 107 ntBASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 AL590762.2-201ENST00000395798 571 ntBASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 RNU6-193P-201ENST00000410977 107 ntBASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 AL358176.3-201ENST00000420757 454 ntBASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 PSMA6P3-201ENST00000428242 164 ntBASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 TIMM9P1-201ENST00000436122 256 ntBASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 EEF1A1P1-201ENST00000447052 739 ntBASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 AC021146.1-201ENST00000511202 716 ntBASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 AC114797.1-201ENST00000514003 728 ntBASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 RFPL4AP5-201ENST00000514977 504 ntBASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 SNORA31.9-201ENST00000516429 84 ntBASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 BTF3P12-201ENST00000519620 469 ntBASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 MIR4742-201ENST00000581069 85 ntBASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 UBE2L4-201ENST00000587688 464 ntBASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 LLPHP1-201ENST00000603571 367 ntBASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 AC104237.2-201ENST00000612456 443 ntBASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 AC015914.2-201ENST00000618167 288 ntBASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 AL122126.1-201ENST00000546905 1318 ntBASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms