Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 AC020916.2-201ENST00000591242 360 ntBASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 COX6CP7-201ENST00000597056 208 ntBASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 AL160281.1-201ENST00000605307 311 ntBASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 AL121917.1-203ENST00000605534 577 ntBASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 AL352984.2-202ENST00000613699 155 ntBASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNFT1Q5M7Z0 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 TTC41P-205ENST00000551270 3963 ntBASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 SELENOWP1-201ENST00000322792 252 ntBASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 RNU6-700P-201ENST00000391043 107 ntBASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 U3.42-201ENST00000408746 214 ntBASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 RNA5SP111-201ENST00000411386 101 ntBASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 VTI1BP4-201ENST00000427516 527 ntBASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 MTCO1P5-201ENST00000433573 344 ntBASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 AL445665.1-202ENST00000452436 324 ntBASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 ISCUP1-201ENST00000454451 448 ntBASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 AC005798.1-201ENST00000513715 387 ntBASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 AC073581.1-201ENST00000519036 575 ntBASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 AC100870.1-201ENST00000522035 505 ntBASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 AC104576.1-201ENST00000524225 88 ntBASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 AC007159.1-201ENST00000566529 4706 ntBASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 AL162424.1-201ENST00000602325 221 ntBASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 AL670379.6-201ENST00000603753 252 ntBASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 AL670379.1-201ENST00000604752 252 ntBASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 AL670379.5-201ENST00000605253 252 ntBASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 AL670379.8-201ENST00000605353 252 ntBASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 AL670379.7-201ENST00000605823 252 ntBASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 RN7SL787P-201ENST00000613000 284 ntBASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 AC130650.2-201ENST00000618736 2403 ntBASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 AOX3P-204ENST00000491025 2107 ntBASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNFT1Q5M7Z0 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 SHQ1P1-201ENST00000437111 1544 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 RNU4-44P-201ENST00000363050 141 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 RNA5SP333-201ENST00000363466 118 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 RNU6-1284P-201ENST00000363701 100 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 RNA5SP500-201ENST00000364486 119 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 RNA5SP334-201ENST00000364825 118 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 RNU6-290P-201ENST00000365212 101 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 Y_RNA.480-201ENST00000384364 102 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 Y_RNA.488-201ENST00000384403 102 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 AL591034.2-201ENST00000402839 359 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 AL033519.2-201ENST00000403958 392 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 EI24P1-201ENST00000416584 867 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 RPL12P16-201ENST00000431098 498 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 BX679664.1-201ENST00000434429 253 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 AC064862.4-201ENST00000442180 334 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 AP000281.1-201ENST00000444036 316 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 RPS26P56-201ENST00000444468 240 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 AC023141.9-201ENST00000458734 412 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 AP001324.2-201ENST00000461163 319 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 AC083795.1-201ENST00000491760 320 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 RN7SL284P-201ENST00000498823 275 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms