Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 MIR1289-2-201ENST00000408360 111 ntBASIC2.83□□□□□ -1.96
RFX7Q2KHR2 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.83□□□□□ -1.96
RFX7Q2KHR2 AC073310.1-201ENST00000423226 1033 ntBASIC2.83□□□□□ -1.96
RFX7Q2KHR2 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.83□□□□□ -1.96
RFX7Q2KHR2 AC005189.1-201ENST00000431286 310 ntBASIC2.83□□□□□ -1.96
RFX7Q2KHR2 RPS24P8-201ENST00000431490 402 ntBASIC2.83□□□□□ -1.96
RFX7Q2KHR2 AC018634.1-201ENST00000437554 401 ntBASIC2.83□□□□□ -1.96
RFX7Q2KHR2 ARL4AP2-201ENST00000507378 601 ntBASIC2.83□□□□□ -1.96
RFX7Q2KHR2 XKRY-201ENST00000510392 1100 ntBASIC2.83□□□□□ -1.96
RFX7Q2KHR2 RNA5SP281-201ENST00000516504 135 ntBASIC2.83□□□□□ -1.96
RFX7Q2KHR2 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.83□□□□□ -1.96
RFX7Q2KHR2 AF279873.1-201ENST00000523393 313 ntBASIC2.83□□□□□ -1.96
RFX7Q2KHR2 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
RFX7Q2KHR2 AC021269.2-201ENST00000532318 330 ntBASIC2.83□□□□□ -1.96
RFX7Q2KHR2 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RFX7Q2KHR2 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.83□□□□□ -1.96
RFX7Q2KHR2 AC105137.2-201ENST00000569073 466 ntBASIC2.83□□□□□ -1.96
RFX7Q2KHR2 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.83□□□□□ -1.96
RFX7Q2KHR2 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
RFX7Q2KHR2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RFX7Q2KHR2 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
RFX7Q2KHR2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RFX7Q2KHR2 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
RFX7Q2KHR2 AL591416.1-201ENST00000404015 867 ntBASIC2.82□□□□□ -1.96
RFX7Q2KHR2 AC013404.1-201ENST00000413068 249 ntBASIC2.82□□□□□ -1.96
RFX7Q2KHR2 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.82□□□□□ -1.96
RFX7Q2KHR2 IFNA11P-201ENST00000446352 526 ntBASIC2.82□□□□□ -1.96
RFX7Q2KHR2 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.82□□□□□ -1.96
RFX7Q2KHR2 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.82□□□□□ -1.96
RFX7Q2KHR2 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.82□□□□□ -1.96
RFX7Q2KHR2 KLHL2P1-201ENST00000508691 521 ntBASIC2.82□□□□□ -1.96
RFX7Q2KHR2 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RFX7Q2KHR2 MTCYBP37-201ENST00000510642 1133 ntBASIC2.82□□□□□ -1.96
RFX7Q2KHR2 RNU1-61P-201ENST00000516107 151 ntBASIC2.82□□□□□ -1.96
RFX7Q2KHR2 RN7SKP234-201ENST00000517173 224 ntBASIC2.82□□□□□ -1.96
RFX7Q2KHR2 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.82□□□□□ -1.96
RFX7Q2KHR2 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.82□□□□□ -1.96
RFX7Q2KHR2 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.82□□□□□ -1.96
RFX7Q2KHR2 MIR6766-201ENST00000622641 72 ntBASIC2.82□□□□□ -1.96
RFX7Q2KHR2 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
RFX7Q2KHR2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
RFX7Q2KHR2 RNU1-73P-201ENST00000383971 164 ntBASIC2.81□□□□□ -1.96
RFX7Q2KHR2 OR51A3P-201ENST00000413596 924 ntBASIC2.81□□□□□ -1.96
RFX7Q2KHR2 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.81□□□□□ -1.96
RFX7Q2KHR2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.81□□□□□ -1.96
RFX7Q2KHR2 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.81□□□□□ -1.96
RFX7Q2KHR2 RPL17P49-201ENST00000443728 411 ntBASIC2.81□□□□□ -1.96
RFX7Q2KHR2 FAM103A2P-201ENST00000444122 354 ntBASIC2.81□□□□□ -1.96
RFX7Q2KHR2 RSL24D1P2-201ENST00000445584 366 ntBASIC2.81□□□□□ -1.96
RFX7Q2KHR2 UBE2V2P4-201ENST00000447495 259 ntBASIC2.81□□□□□ -1.96
RFX7Q2KHR2 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.81□□□□□ -1.96
RFX7Q2KHR2 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.81□□□□□ -1.96
RFX7Q2KHR2 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.81□□□□□ -1.96
RFX7Q2KHR2 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.81□□□□□ -1.96
RFX7Q2KHR2 ACTR6P1-201ENST00000514311 1104 ntBASIC2.81□□□□□ -1.96
RFX7Q2KHR2 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.81□□□□□ -1.96
RFX7Q2KHR2 AC025423.2-201ENST00000537570 439 ntBASIC2.81□□□□□ -1.96
RFX7Q2KHR2 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.81□□□□□ -1.96
RFX7Q2KHR2 MIR4648-201ENST00000580107 72 ntBASIC2.81□□□□□ -1.96
RFX7Q2KHR2 AC025754.2-201ENST00000606491 432 ntBASIC2.81□□□□□ -1.96
RFX7Q2KHR2 AC007620.3-201ENST00000608131 497 ntBASIC2.81□□□□□ -1.96
RFX7Q2KHR2 AL390240.1-201ENST00000612950 384 ntBASIC2.81□□□□□ -1.96
RFX7Q2KHR2 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.81□□□□□ -1.96
RFX7Q2KHR2 RNU6-600P-201ENST00000362524 99 ntBASIC2.8□□□□□ -1.96
RFX7Q2KHR2 RAP1BP1-201ENST00000412709 553 ntBASIC2.8□□□□□ -1.96
RFX7Q2KHR2 ATG3P1-201ENST00000419507 911 ntBASIC2.8□□□□□ -1.96
RFX7Q2KHR2 AC023128.2-201ENST00000420880 1223 ntBASIC2.8□□□□□ -1.96
RFX7Q2KHR2 XKRYP6-201ENST00000440468 1116 ntBASIC2.8□□□□□ -1.96
RFX7Q2KHR2 XKRYP3-201ENST00000442113 1116 ntBASIC2.8□□□□□ -1.96
RFX7Q2KHR2 snoU13.23-201ENST00000458863 104 ntBASIC2.8□□□□□ -1.96
RFX7Q2KHR2 RNU6-56P-201ENST00000516986 93 ntBASIC2.8□□□□□ -1.96
RFX7Q2KHR2 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.8□□□□□ -1.96
RFX7Q2KHR2 AC078814.3-201ENST00000553036 491 ntBASIC2.8□□□□□ -1.96
RFX7Q2KHR2 AC090616.5-202ENST00000582111 297 ntBASIC2.8□□□□□ -1.96
RFX7Q2KHR2 AC113368.1-201ENST00000603736 382 ntBASIC2.8□□□□□ -1.96
RFX7Q2KHR2 uc_338.9-201ENST00000617424 182 ntBASIC2.8□□□□□ -1.96
RFX7Q2KHR2 AC006249.1-201ENST00000621223 471 ntBASIC2.8□□□□□ -1.96
RFX7Q2KHR2 MAPK10-322ENST00000641485 4530 ntBASIC2.8□□□□□ -1.96
RFX7Q2KHR2 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.8□□□□□ -1.96
RFX7Q2KHR2 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RFX7Q2KHR2 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
RFX7Q2KHR2 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
RFX7Q2KHR2 HMGN2P35-201ENST00000412164 270 ntBASIC2.79□□□□□ -1.96
RFX7Q2KHR2 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.79□□□□□ -1.96
RFX7Q2KHR2 HMGB1P18-201ENST00000438801 619 ntBASIC2.79□□□□□ -1.96
RFX7Q2KHR2 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.79□□□□□ -1.96
RFX7Q2KHR2 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.79□□□□□ -1.96
RFX7Q2KHR2 AL353705.4-201ENST00000449661 238 ntBASIC2.79□□□□□ -1.96
RFX7Q2KHR2 NCOR1P1-202ENST00000486162 291 ntBASIC2.79□□□□□ -1.96
RFX7Q2KHR2 RN7SKP244-201ENST00000516513 307 ntBASIC2.79□□□□□ -1.96
RFX7Q2KHR2 RNU6-711P-201ENST00000517255 106 ntBASIC2.79□□□□□ -1.96
RFX7Q2KHR2 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.79□□□□□ -1.96
RFX7Q2KHR2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.79□□□□□ -1.96
RFX7Q2KHR2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
RFX7Q2KHR2 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.79□□□□□ -1.96
RFX7Q2KHR2 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RFX7Q2KHR2 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.79□□□□□ -1.96
RFX7Q2KHR2 AC084373.1-201ENST00000603311 235 ntBASIC2.79□□□□□ -1.96
RFX7Q2KHR2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
RFX7Q2KHR2 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 210.4 ms