Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HOXC5Q00444 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
HOXC5Q00444 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HOXC5Q00444 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HOXC5Q00444 AC007342.9-201ENST00000623877 1385 ntBASIC2.38□□□□□ -2.03
HOXC5Q00444 RNU6-989P-201ENST00000362756 107 ntBASIC2.38□□□□□ -2.03
HOXC5Q00444 RNU1-109P-201ENST00000383960 147 ntBASIC2.38□□□□□ -2.03
HOXC5Q00444 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
HOXC5Q00444 AC105272.1-201ENST00000438604 198 ntBASIC2.38□□□□□ -2.03
HOXC5Q00444 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.38□□□□□ -2.03
HOXC5Q00444 DNAJC19P8-201ENST00000452887 259 ntBASIC2.38□□□□□ -2.03
HOXC5Q00444 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.38□□□□□ -2.03
HOXC5Q00444 snoU13.22-201ENST00000459428 104 ntBASIC2.38□□□□□ -2.03
HOXC5Q00444 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.38□□□□□ -2.03
HOXC5Q00444 AL136126.1-201ENST00000473603 402 ntBASIC2.38□□□□□ -2.03
HOXC5Q00444 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.38□□□□□ -2.03
HOXC5Q00444 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.38□□□□□ -2.03
HOXC5Q00444 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.38□□□□□ -2.03
HOXC5Q00444 COX6CP8-201ENST00000522620 226 ntBASIC2.38□□□□□ -2.03
HOXC5Q00444 AC083923.1-201ENST00000523708 376 ntBASIC2.38□□□□□ -2.03
HOXC5Q00444 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.38□□□□□ -2.03
HOXC5Q00444 AC087481.2-201ENST00000565492 330 ntBASIC2.38□□□□□ -2.03
HOXC5Q00444 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.38□□□□□ -2.03
HOXC5Q00444 AC138761.3-201ENST00000579993 334 ntBASIC2.38□□□□□ -2.03
HOXC5Q00444 AC091057.2-201ENST00000602594 792 ntBASIC2.38□□□□□ -2.03
HOXC5Q00444 AC103881.1-201ENST00000603476 538 ntBASIC2.38□□□□□ -2.03
HOXC5Q00444 AL033523.1-201ENST00000605153 153 ntBASIC2.38□□□□□ -2.03
HOXC5Q00444 AC018755.4-201ENST00000619715 454 ntBASIC2.38□□□□□ -2.03
HOXC5Q00444 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
HOXC5Q00444 AC090897.3-201ENST00000636973 1157 ntBASIC2.38□□□□□ -2.03
HOXC5Q00444 AC017104.5-201ENST00000637647 639 ntBASIC2.38□□□□□ -2.03
HOXC5Q00444 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.38□□□□□ -2.03
HOXC5Q00444 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.38□□□□□ -2.03
HOXC5Q00444 CUL1P1-201ENST00000509510 2425 ntBASIC2.38□□□□□ -2.03
HOXC5Q00444 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.37□□□□□ -2.03
HOXC5Q00444 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
HOXC5Q00444 RNA5SP258-201ENST00000362750 119 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HOXC5Q00444 RNU6-339P-201ENST00000384310 107 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 AL360182.1-201ENST00000397433 468 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 ZNF736P10Y-201ENST00000403990 1110 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 AC092745.2-202ENST00000411880 369 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 RPLP0P7-201ENST00000416050 667 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 OFD1P18Y-201ENST00000420889 959 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC5Q00444 UBE2D3P2-201ENST00000424409 445 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.37□□□□□ -2.03
HOXC5Q00444 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC5Q00444 AC010881.1-201ENST00000433830 235 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 AC000041.1-201ENST00000439655 175 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 AC025750.2-201ENST00000442609 450 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 RPS26P30-201ENST00000443431 335 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 RPS26P56-201ENST00000444468 240 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.37□□□□□ -2.03
HOXC5Q00444 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HOXC5Q00444 SETP6-201ENST00000479329 568 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 SRIP1-201ENST00000489235 288 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 AIG1P1-201ENST00000503376 148 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC5Q00444 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.37□□□□□ -2.03
HOXC5Q00444 RNU6-551P-201ENST00000516661 103 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 RNA5SP402-201ENST00000517148 110 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.37□□□□□ -2.03
HOXC5Q00444 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.37□□□□□ -2.03
HOXC5Q00444 AC022690.1-201ENST00000526681 550 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.37□□□□□ -2.03
HOXC5Q00444 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC5Q00444 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC5Q00444 AC012182.1-201ENST00000570133 895 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 AC007619.2-201ENST00000605743 379 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 AL513477.2-201ENST00000607858 568 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 AC013468.1-201ENST00000608680 598 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.37□□□□□ -2.03
HOXC5Q00444 STMN1P1-201ENST00000617809 440 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 AC024595.1-201ENST00000623088 387 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 AC095031.1-201ENST00000623685 672 ntBASIC2.37□□□□□ -2.03
HOXC5Q00444 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC5Q00444 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.37□□□□□ -2.03
HOXC5Q00444 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
HOXC5Q00444 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.37□□□□□ -2.03
HOXC5Q00444 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.37□□□□□ -2.03
HOXC5Q00444 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.36□□□□□ -2.03
HOXC5Q00444 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HOXC5Q00444 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
HOXC5Q00444 FRG1BP-201ENST00000278882 761 ntBASIC2.36□□□□□ -2.03
HOXC5Q00444 ENSAP3-201ENST00000312710 333 ntBASIC2.36□□□□□ -2.03
HOXC5Q00444 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
HOXC5Q00444 SNORA9-201ENST00000384215 133 ntBASIC2.36□□□□□ -2.03
HOXC5Q00444 SNORA51.12-201ENST00000384448 134 ntBASIC2.36□□□□□ -2.03
HOXC5Q00444 TAF9BP2-201ENST00000400856 499 ntBASIC2.36□□□□□ -2.03
HOXC5Q00444 AL589655.1-201ENST00000405398 482 ntBASIC2.36□□□□□ -2.03
HOXC5Q00444 RNU2-52P-201ENST00000410680 190 ntBASIC2.36□□□□□ -2.03
HOXC5Q00444 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXC5Q00444 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.36□□□□□ -2.03
HOXC5Q00444 ATG3P1-201ENST00000419507 911 ntBASIC2.36□□□□□ -2.03
HOXC5Q00444 AC073310.1-201ENST00000423226 1033 ntBASIC2.36□□□□□ -2.03
HOXC5Q00444 AC079780.1-201ENST00000428259 207 ntBASIC2.36□□□□□ -2.03
HOXC5Q00444 CR769767.1-201ENST00000436337 346 ntBASIC2.36□□□□□ -2.03
HOXC5Q00444 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms