Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC133104.1-201ENST00000429100 218 ntBASIC4□□□□□ -1.77
RAE1P78406 RPL31P35-201ENST00000431058 377 ntBASIC4□□□□□ -1.77
RAE1P78406 AL139415.2-201ENST00000431968 163 ntBASIC4□□□□□ -1.77
RAE1P78406 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4□□□□□ -1.77
RAE1P78406 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4□□□□□ -1.77
RAE1P78406 AL451074.3-201ENST00000437709 472 ntBASIC4□□□□□ -1.77
RAE1P78406 RBMX2P4-201ENST00000441256 376 ntBASIC4□□□□□ -1.77
RAE1P78406 RPL23AP33-201ENST00000442301 452 ntBASIC4□□□□□ -1.77
RAE1P78406 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4□□□□□ -1.77
RAE1P78406 snoU13.1-201ENST00000459157 104 ntBASIC4□□□□□ -1.77
RAE1P78406 AC146507.1-201ENST00000468335 354 ntBASIC4□□□□□ -1.77
RAE1P78406 AC023598.1-201ENST00000472521 361 ntBASIC4□□□□□ -1.77
RAE1P78406 RPL21P103-201ENST00000479921 488 ntBASIC4□□□□□ -1.77
RAE1P78406 AC055855.1-201ENST00000489563 579 ntBASIC4□□□□□ -1.77
RAE1P78406 RPL35P6-201ENST00000490024 372 ntBASIC4□□□□□ -1.77
RAE1P78406 AC017037.1-201ENST00000508460 471 ntBASIC4□□□□□ -1.77
RAE1P78406 AC008958.1-201ENST00000511047 682 ntBASIC4□□□□□ -1.77
RAE1P78406 SAP18P1-201ENST00000512058 390 ntBASIC4□□□□□ -1.77
RAE1P78406 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4□□□□□ -1.77
RAE1P78406 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4□□□□□ -1.77
RAE1P78406 AC010493.1-201ENST00000513479 292 ntBASIC4□□□□□ -1.77
RAE1P78406 RNA5SP154-201ENST00000516193 111 ntBASIC4□□□□□ -1.77
RAE1P78406 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4□□□□□ -1.77
RAE1P78406 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4□□□□□ -1.77
RAE1P78406 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4□□□□□ -1.77
RAE1P78406 AC063950.1-201ENST00000552036 308 ntBASIC4□□□□□ -1.77
RAE1P78406 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4□□□□□ -1.77
RAE1P78406 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RAE1P78406 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4□□□□□ -1.77
RAE1P78406 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4□□□□□ -1.77
RAE1P78406 AC107954.1-201ENST00000565906 727 ntBASIC4□□□□□ -1.77
RAE1P78406 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4□□□□□ -1.77
RAE1P78406 MIR3118-1-201ENST00000581787 76 ntBASIC4□□□□□ -1.77
RAE1P78406 AC060771.1-201ENST00000582031 164 ntBASIC4□□□□□ -1.77
RAE1P78406 AC068790.3-201ENST00000602988 553 ntBASIC4□□□□□ -1.77
RAE1P78406 AC010680.4-201ENST00000605334 543 ntBASIC4□□□□□ -1.77
RAE1P78406 AC055876.5-201ENST00000605667 259 ntBASIC4□□□□□ -1.77
RAE1P78406 AC019193.2-201ENST00000610012 634 ntBASIC4□□□□□ -1.77
RAE1P78406 AC015813.4-201ENST00000610469 179 ntBASIC4□□□□□ -1.77
RAE1P78406 FAM27D1-201ENST00000612308 341 ntBASIC4□□□□□ -1.77
RAE1P78406 MLECP1-201ENST00000615893 709 ntBASIC4□□□□□ -1.77
RAE1P78406 AC002550.2-201ENST00000621246 394 ntBASIC4□□□□□ -1.77
RAE1P78406 AC091953.2-201ENST00000623979 160 ntBASIC4□□□□□ -1.77
RAE1P78406 CR381572.1-201ENST00000625098 102 ntBASIC4□□□□□ -1.77
RAE1P78406 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4□□□□□ -1.77
RAE1P78406 MIR6863-201ENST00000636112 90 ntBASIC4□□□□□ -1.77
RAE1P78406 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4□□□□□ -1.77
RAE1P78406 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4□□□□□ -1.77
RAE1P78406 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4□□□□□ -1.77
RAE1P78406 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
RAE1P78406 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4□□□□□ -1.77
RAE1P78406 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
RAE1P78406 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4□□□□□ -1.77
RAE1P78406 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
RAE1P78406 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
RAE1P78406 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RAE1P78406 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RAE1P78406 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
RAE1P78406 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RAE1P78406 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RAE1P78406 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
RAE1P78406 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RAE1P78406 RNU5E-1-201ENST00000362477 120 ntBASIC3.99□□□□□ -1.77
RAE1P78406 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.99□□□□□ -1.77
RAE1P78406 MTCO3P40-201ENST00000392516 676 ntBASIC3.99□□□□□ -1.77
RAE1P78406 BTF3P7-201ENST00000407097 488 ntBASIC3.99□□□□□ -1.77
RAE1P78406 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.99□□□□□ -1.77
RAE1P78406 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.99□□□□□ -1.77
RAE1P78406 RPL26P29-201ENST00000415623 438 ntBASIC3.99□□□□□ -1.77
RAE1P78406 MTND4LP11-201ENST00000422184 280 ntBASIC3.99□□□□□ -1.77
RAE1P78406 CHIAP3-201ENST00000423668 1133 ntBASIC3.99□□□□□ -1.77
RAE1P78406 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.99□□□□□ -1.77
RAE1P78406 AC233728.2-201ENST00000425348 757 ntBASIC3.99□□□□□ -1.77
RAE1P78406 TIMM9P3-201ENST00000428659 274 ntBASIC3.99□□□□□ -1.77
RAE1P78406 AC104850.1-201ENST00000435940 476 ntBASIC3.99□□□□□ -1.77
RAE1P78406 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.99□□□□□ -1.77
RAE1P78406 FABP3P2-201ENST00000453169 399 ntBASIC3.99□□□□□ -1.77
RAE1P78406 MTND1P9-201ENST00000453775 944 ntBASIC3.99□□□□□ -1.77
RAE1P78406 RAD23BP3-201ENST00000454157 1152 ntBASIC3.99□□□□□ -1.77
RAE1P78406 AC013267.1-201ENST00000458227 267 ntBASIC3.99□□□□□ -1.77
RAE1P78406 AL672167.3-201ENST00000465951 960 ntBASIC3.99□□□□□ -1.77
RAE1P78406 MTCO3P38-201ENST00000468910 766 ntBASIC3.99□□□□□ -1.77
RAE1P78406 AC109327.1-201ENST00000471666 403 ntBASIC3.99□□□□□ -1.77
RAE1P78406 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
RAE1P78406 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RAE1P78406 MTAPP1-201ENST00000489154 819 ntBASIC3.99□□□□□ -1.77
RAE1P78406 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.99□□□□□ -1.77
RAE1P78406 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.99□□□□□ -1.77
RAE1P78406 AC093824.1-201ENST00000508796 343 ntBASIC3.99□□□□□ -1.77
RAE1P78406 PTGES3P3-201ENST00000511479 482 ntBASIC3.99□□□□□ -1.77
RAE1P78406 RNU6-718P-201ENST00000516166 105 ntBASIC3.99□□□□□ -1.77
RAE1P78406 Vault.3-201ENST00000516676 95 ntBASIC3.99□□□□□ -1.77
RAE1P78406 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.99□□□□□ -1.77
RAE1P78406 AC107934.1-201ENST00000522215 217 ntBASIC3.99□□□□□ -1.77
RAE1P78406 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.99□□□□□ -1.77
RAE1P78406 AP001893.2-201ENST00000526949 202 ntBASIC3.99□□□□□ -1.77
RAE1P78406 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.99□□□□□ -1.77
RAE1P78406 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RAE1P78406 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.99□□□□□ -1.77
RAE1P78406 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms