Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 AL049780.3-201ENST00000624612 1583 ntBASIC3.67□□□□□ -1.82
ASIC1P78348 AL035425.3-201ENST00000564206 4996 ntBASIC3.66□□□□□ -1.82
ASIC1P78348 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ASIC1P78348 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
ASIC1P78348 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
ASIC1P78348 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ASIC1P78348 RNU6-50P-201ENST00000362356 103 ntBASIC3.66□□□□□ -1.82
ASIC1P78348 RNA5SP295-201ENST00000362655 121 ntBASIC3.66□□□□□ -1.82
ASIC1P78348 RNU6-216P-201ENST00000363282 104 ntBASIC3.66□□□□□ -1.82
ASIC1P78348 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
ASIC1P78348 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.66□□□□□ -1.82
ASIC1P78348 Y_RNA.472-201ENST00000384322 102 ntBASIC3.66□□□□□ -1.82
ASIC1P78348 RNA5SP129-201ENST00000410276 118 ntBASIC3.66□□□□□ -1.82
ASIC1P78348 RPL7P44-201ENST00000424827 742 ntBASIC3.66□□□□□ -1.82
ASIC1P78348 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.66□□□□□ -1.82
ASIC1P78348 HSFY7P-201ENST00000432672 318 ntBASIC3.66□□□□□ -1.82
ASIC1P78348 RPL23AP74-201ENST00000437246 471 ntBASIC3.66□□□□□ -1.82
ASIC1P78348 HSFY8P-201ENST00000437934 318 ntBASIC3.66□□□□□ -1.82
ASIC1P78348 ISCA1P2-201ENST00000438679 421 ntBASIC3.66□□□□□ -1.82
ASIC1P78348 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.66□□□□□ -1.82
ASIC1P78348 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.66□□□□□ -1.82
ASIC1P78348 RPL39P6-201ENST00000448289 150 ntBASIC3.66□□□□□ -1.82
ASIC1P78348 MTND2P19-201ENST00000449129 1012 ntBASIC3.66□□□□□ -1.82
ASIC1P78348 HSFY5P-201ENST00000453726 309 ntBASIC3.66□□□□□ -1.82
ASIC1P78348 RN7SL442P-201ENST00000473804 320 ntBASIC3.66□□□□□ -1.82
ASIC1P78348 RPL23AP44-201ENST00000482216 473 ntBASIC3.66□□□□□ -1.82
ASIC1P78348 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.66□□□□□ -1.82
ASIC1P78348 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.66□□□□□ -1.82
ASIC1P78348 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.66□□□□□ -1.82
ASIC1P78348 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.66□□□□□ -1.82
ASIC1P78348 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.66□□□□□ -1.82
ASIC1P78348 AC087481.2-201ENST00000565492 330 ntBASIC3.66□□□□□ -1.82
ASIC1P78348 BNIP3P11-201ENST00000603878 563 ntBASIC3.66□□□□□ -1.82
ASIC1P78348 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.66□□□□□ -1.82
ASIC1P78348 AL138478.1-201ENST00000612252 832 ntBASIC3.66□□□□□ -1.82
ASIC1P78348 AC023158.2-201ENST00000614876 543 ntBASIC3.66□□□□□ -1.82
ASIC1P78348 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.66□□□□□ -1.82
ASIC1P78348 AC018816.2-201ENST00000621460 353 ntBASIC3.66□□□□□ -1.82
ASIC1P78348 AC120349.2-201ENST00000625002 298 ntBASIC3.66□□□□□ -1.82
ASIC1P78348 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ASIC1P78348 AC109315.1-201ENST00000584143 1347 ntBASIC3.66□□□□□ -1.82
ASIC1P78348 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
ASIC1P78348 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
ASIC1P78348 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.65□□□□□ -1.82
ASIC1P78348 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ASIC1P78348 RNA5SP229-201ENST00000410809 99 ntBASIC3.65□□□□□ -1.83
ASIC1P78348 RPS7P13-201ENST00000413955 498 ntBASIC3.65□□□□□ -1.83
ASIC1P78348 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.65□□□□□ -1.83
ASIC1P78348 OR1AA1P-201ENST00000419597 916 ntBASIC3.65□□□□□ -1.83
ASIC1P78348 AL158156.1-201ENST00000422509 473 ntBASIC3.65□□□□□ -1.83
ASIC1P78348 SDR42E1P3-201ENST00000438345 502 ntBASIC3.65□□□□□ -1.83
ASIC1P78348 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.65□□□□□ -1.83
ASIC1P78348 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.65□□□□□ -1.83
ASIC1P78348 Z99127.3-201ENST00000448158 395 ntBASIC3.65□□□□□ -1.83
ASIC1P78348 CYCSP35-201ENST00000451978 304 ntBASIC3.65□□□□□ -1.83
ASIC1P78348 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.65□□□□□ -1.83
ASIC1P78348 HMGN2P16-201ENST00000456802 261 ntBASIC3.65□□□□□ -1.83
ASIC1P78348 BTF3P5-201ENST00000457252 467 ntBASIC3.65□□□□□ -1.83
ASIC1P78348 RPL21P10-201ENST00000463521 490 ntBASIC3.65□□□□□ -1.83
ASIC1P78348 AC104164.3-201ENST00000467363 1258 ntBASIC3.65□□□□□ -1.83
ASIC1P78348 HMGB1P25-201ENST00000468402 607 ntBASIC3.65□□□□□ -1.83
ASIC1P78348 RPL21P13-201ENST00000488305 481 ntBASIC3.65□□□□□ -1.83
ASIC1P78348 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.65□□□□□ -1.83
ASIC1P78348 HMGB3P15-201ENST00000507326 574 ntBASIC3.65□□□□□ -1.83
ASIC1P78348 AC119751.4-201ENST00000507498 357 ntBASIC3.65□□□□□ -1.83
ASIC1P78348 AC113420.1-201ENST00000507903 571 ntBASIC3.65□□□□□ -1.83
ASIC1P78348 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.65□□□□□ -1.83
ASIC1P78348 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.65□□□□□ -1.83
ASIC1P78348 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.65□□□□□ -1.83
ASIC1P78348 AC037471.2-201ENST00000564941 598 ntBASIC3.65□□□□□ -1.83
ASIC1P78348 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.65□□□□□ -1.83
ASIC1P78348 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.65□□□□□ -1.83
ASIC1P78348 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.65□□□□□ -1.83
ASIC1P78348 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.65□□□□□ -1.83
ASIC1P78348 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.65□□□□□ -1.83
ASIC1P78348 AL121895.2-201ENST00000619558 447 ntBASIC3.65□□□□□ -1.83
ASIC1P78348 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.65□□□□□ -1.83
ASIC1P78348 AC022509.4-201ENST00000621404 572 ntBASIC3.65□□□□□ -1.83
ASIC1P78348 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.65□□□□□ -1.83
ASIC1P78348 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.65□□□□□ -1.83
ASIC1P78348 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.65□□□□□ -1.83
ASIC1P78348 LINC02211-204ENST00000642024 1070 ntBASIC3.65□□□□□ -1.83
ASIC1P78348 AL672296.1-201ENST00000427780 2158 ntBASIC3.65□□□□□ -1.83
ASIC1P78348 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ASIC1P78348 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.64□□□□□ -1.83
ASIC1P78348 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
ASIC1P78348 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
ASIC1P78348 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
ASIC1P78348 SNRPEP3-201ENST00000338402 276 ntBASIC3.64□□□□□ -1.83
ASIC1P78348 NACA3P-201ENST00000359690 648 ntBASIC3.64□□□□□ -1.83
ASIC1P78348 SNORD51-201ENST00000384320 80 ntBASIC3.64□□□□□ -1.83
ASIC1P78348 MIR591-201ENST00000385290 95 ntBASIC3.64□□□□□ -1.83
ASIC1P78348 Z92545.1-201ENST00000411782 234 ntBASIC3.64□□□□□ -1.83
ASIC1P78348 AC092447.6-201ENST00000414578 210 ntBASIC3.64□□□□□ -1.83
ASIC1P78348 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ASIC1P78348 MTND4LP10-201ENST00000435146 291 ntBASIC3.64□□□□□ -1.83
ASIC1P78348 MTCYBP31-201ENST00000438855 1122 ntBASIC3.64□□□□□ -1.83
ASIC1P78348 RPL7P52-201ENST00000449200 742 ntBASIC3.64□□□□□ -1.83
ASIC1P78348 AC115115.1-201ENST00000449927 248 ntBASIC3.64□□□□□ -1.83
ASIC1P78348 OFD1P3Y-201ENST00000453312 783 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms