Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 COX6B1P7-201ENST00000430845 235 ntBASIC5.01□□□□□ -1.61
HERVK_113P62684 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.01□□□□□ -1.61
HERVK_113P62684 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.01□□□□□ -1.61
HERVK_113P62684 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HERVK_113P62684 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.01□□□□□ -1.61
HERVK_113P62684 AC022795.1-201ENST00000473808 480 ntBASIC5.01□□□□□ -1.61
HERVK_113P62684 AP000893.1-201ENST00000474462 794 ntBASIC5.01□□□□□ -1.61
HERVK_113P62684 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.01□□□□□ -1.61
HERVK_113P62684 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.01□□□□□ -1.61
HERVK_113P62684 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.01□□□□□ -1.61
HERVK_113P62684 Y_RNA.693-201ENST00000516641 110 ntBASIC5.01□□□□□ -1.61
HERVK_113P62684 SNORA67.7-201ENST00000516664 135 ntBASIC5.01□□□□□ -1.61
HERVK_113P62684 RNU6-445P-201ENST00000516949 107 ntBASIC5.01□□□□□ -1.61
HERVK_113P62684 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.01□□□□□ -1.61
HERVK_113P62684 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HERVK_113P62684 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.01□□□□□ -1.61
HERVK_113P62684 AC090616.5-202ENST00000582111 297 ntBASIC5.01□□□□□ -1.61
HERVK_113P62684 AC091178.1-203ENST00000584586 279 ntBASIC5.01□□□□□ -1.61
HERVK_113P62684 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.01□□□□□ -1.61
HERVK_113P62684 RPL7P50-201ENST00000600588 727 ntBASIC5.01□□□□□ -1.61
HERVK_113P62684 AL391646.1-201ENST00000603860 190 ntBASIC5.01□□□□□ -1.61
HERVK_113P62684 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.01□□□□□ -1.61
HERVK_113P62684 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.01□□□□□ -1.61
HERVK_113P62684 FAM27D1-201ENST00000612308 341 ntBASIC5.01□□□□□ -1.61
HERVK_113P62684 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HERVK_113P62684 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HERVK_113P62684 AL445363.3-201ENST00000623080 671 ntBASIC5.01□□□□□ -1.61
HERVK_113P62684 AC015908.5-201ENST00000623289 343 ntBASIC5.01□□□□□ -1.61
HERVK_113P62684 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HERVK_113P62684 AC092125.1-201ENST00000562568 1995 ntBASIC5.01□□□□□ -1.61
HERVK_113P62684 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HERVK_113P62684 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.01□□□□□ -1.61
HERVK_113P62684 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.01□□□□□ -1.61
HERVK_113P62684 AC005332.5-201ENST00000591222 2919 ntBASIC5.01□□□□□ -1.61
HERVK_113P62684 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HERVK_113P62684 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HERVK_113P62684 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.01□□□□□ -1.61
HERVK_113P62684 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HERVK_113P62684 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HERVK_113P62684 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HERVK_113P62684 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.01□□□□□ -1.61
HERVK_113P62684 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HERVK_113P62684 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5□□□□□ -1.61
HERVK_113P62684 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HERVK_113P62684 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5□□□□□ -1.61
HERVK_113P62684 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5□□□□□ -1.61
HERVK_113P62684 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5□□□□□ -1.61
HERVK_113P62684 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5□□□□□ -1.61
HERVK_113P62684 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5□□□□□ -1.61
HERVK_113P62684 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
HERVK_113P62684 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HERVK_113P62684 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HERVK_113P62684 CBX3P1-201ENST00000325243 554 ntBASIC5□□□□□ -1.61
HERVK_113P62684 Y_RNA.11-201ENST00000362375 109 ntBASIC5□□□□□ -1.61
HERVK_113P62684 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5□□□□□ -1.61
HERVK_113P62684 SNORA68.2-201ENST00000391263 128 ntBASIC5□□□□□ -1.61
HERVK_113P62684 AC097374.1-203ENST00000400783 485 ntBASIC5□□□□□ -1.61
HERVK_113P62684 RN7SKP202-201ENST00000410439 330 ntBASIC5□□□□□ -1.61
HERVK_113P62684 RNU2-41P-201ENST00000410991 178 ntBASIC5□□□□□ -1.61
HERVK_113P62684 VDAC1P9-201ENST00000412766 841 ntBASIC5□□□□□ -1.61
HERVK_113P62684 AMD1P2-201ENST00000412936 992 ntBASIC5□□□□□ -1.61
HERVK_113P62684 AC245054.1-201ENST00000420944 258 ntBASIC5□□□□□ -1.61
HERVK_113P62684 MTCO2P5-201ENST00000422621 426 ntBASIC5□□□□□ -1.61
HERVK_113P62684 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5□□□□□ -1.61
HERVK_113P62684 RPL21P91-201ENST00000429231 479 ntBASIC5□□□□□ -1.61
HERVK_113P62684 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5□□□□□ -1.61
HERVK_113P62684 AL353597.2-202ENST00000434901 373 ntBASIC5□□□□□ -1.61
HERVK_113P62684 USP9YP15-201ENST00000442391 422 ntBASIC5□□□□□ -1.61
HERVK_113P62684 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC5□□□□□ -1.61
HERVK_113P62684 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5□□□□□ -1.61
HERVK_113P62684 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5□□□□□ -1.61
HERVK_113P62684 PLGLA-201ENST00000465668 449 ntBASIC5□□□□□ -1.61
HERVK_113P62684 RN7SL542P-201ENST00000467147 294 ntBASIC5□□□□□ -1.61
HERVK_113P62684 AC034236.1-201ENST00000469891 373 ntBASIC5□□□□□ -1.61
HERVK_113P62684 RPL30P11-201ENST00000495304 339 ntBASIC5□□□□□ -1.61
HERVK_113P62684 AC091951.2-201ENST00000500762 203 ntBASIC5□□□□□ -1.61
HERVK_113P62684 AC114967.1-201ENST00000504890 259 ntBASIC5□□□□□ -1.61
HERVK_113P62684 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5□□□□□ -1.61
HERVK_113P62684 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5□□□□□ -1.61
HERVK_113P62684 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5□□□□□ -1.61
HERVK_113P62684 AC023632.4-201ENST00000517783 191 ntBASIC5□□□□□ -1.61
HERVK_113P62684 AL359212.1-201ENST00000556608 614 ntBASIC5□□□□□ -1.61
HERVK_113P62684 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5□□□□□ -1.61
HERVK_113P62684 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5□□□□□ -1.61
HERVK_113P62684 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5□□□□□ -1.61
HERVK_113P62684 AC099489.2-201ENST00000574976 260 ntBASIC5□□□□□ -1.61
HERVK_113P62684 AC060780.3-201ENST00000589464 80 ntBASIC5□□□□□ -1.61
HERVK_113P62684 AL021997.2-201ENST00000615674 271 ntBASIC5□□□□□ -1.61
HERVK_113P62684 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5□□□□□ -1.61
HERVK_113P62684 AC006133.1-201ENST00000617106 264 ntBASIC5□□□□□ -1.61
HERVK_113P62684 AC009159.1-201ENST00000618386 642 ntBASIC5□□□□□ -1.61
HERVK_113P62684 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5□□□□□ -1.61
HERVK_113P62684 MIR3662-201ENST00000637030 95 ntBASIC5□□□□□ -1.61
HERVK_113P62684 ERCC6-202ENST00000374127 1782 ntBASIC5□□□□□ -1.61
HERVK_113P62684 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
HERVK_113P62684 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
HERVK_113P62684 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HERVK_113P62684 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
HERVK_113P62684 AL450326.2-201ENST00000421913 1962 ntBASIC5□□□□□ -1.61
HERVK_113P62684 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms