Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC092647.1-201ENST00000420654 287 ntBASIC4.59□□□□□ -1.67
RHBDL3P58872 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.59□□□□□ -1.67
RHBDL3P58872 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.59□□□□□ -1.67
RHBDL3P58872 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.59□□□□□ -1.67
RHBDL3P58872 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.59□□□□□ -1.67
RHBDL3P58872 NANOGP6-201ENST00000429190 847 ntBASIC4.59□□□□□ -1.67
RHBDL3P58872 RAC1P7-201ENST00000445367 377 ntBASIC4.59□□□□□ -1.67
RHBDL3P58872 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.59□□□□□ -1.67
RHBDL3P58872 RPS17P13-201ENST00000448974 407 ntBASIC4.59□□□□□ -1.67
RHBDL3P58872 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.59□□□□□ -1.67
RHBDL3P58872 AC072039.1-201ENST00000477611 581 ntBASIC4.59□□□□□ -1.67
RHBDL3P58872 RPL31P61-201ENST00000496160 376 ntBASIC4.59□□□□□ -1.67
RHBDL3P58872 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.59□□□□□ -1.67
RHBDL3P58872 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.59□□□□□ -1.67
RHBDL3P58872 AC026801.2-201ENST00000515352 425 ntBASIC4.59□□□□□ -1.67
RHBDL3P58872 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RHBDL3P58872 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.59□□□□□ -1.67
RHBDL3P58872 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.59□□□□□ -1.67
RHBDL3P58872 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.59□□□□□ -1.67
RHBDL3P58872 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.59□□□□□ -1.67
RHBDL3P58872 AC007954.1-201ENST00000554198 494 ntBASIC4.59□□□□□ -1.67
RHBDL3P58872 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.59□□□□□ -1.67
RHBDL3P58872 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.59□□□□□ -1.67
RHBDL3P58872 AL158211.1-201ENST00000566763 763 ntBASIC4.59□□□□□ -1.67
RHBDL3P58872 OR4K8P-201ENST00000578842 1048 ntBASIC4.59□□□□□ -1.67
RHBDL3P58872 MIR5187-201ENST00000583479 76 ntBASIC4.59□□□□□ -1.67
RHBDL3P58872 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
RHBDL3P58872 AC244505.7-201ENST00000599675 272 ntBASIC4.59□□□□□ -1.67
RHBDL3P58872 AC112187.2-201ENST00000604345 283 ntBASIC4.59□□□□□ -1.67
RHBDL3P58872 AC018714.1-201ENST00000605028 208 ntBASIC4.59□□□□□ -1.67
RHBDL3P58872 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
RHBDL3P58872 AC091304.6-201ENST00000619761 202 ntBASIC4.59□□□□□ -1.67
RHBDL3P58872 AC004777.1-201ENST00000624317 287 ntBASIC4.59□□□□□ -1.67
RHBDL3P58872 PCMTD1P7-201ENST00000634506 357 ntBASIC4.59□□□□□ -1.67
RHBDL3P58872 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.59□□□□□ -1.67
RHBDL3P58872 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RHBDL3P58872 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RHBDL3P58872 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RHBDL3P58872 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.59□□□□□ -1.68
RHBDL3P58872 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
RHBDL3P58872 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.59□□□□□ -1.68
RHBDL3P58872 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RHBDL3P58872 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.58□□□□□ -1.68
RHBDL3P58872 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
RHBDL3P58872 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.58□□□□□ -1.68
RHBDL3P58872 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RHBDL3P58872 AL049545.1-201ENST00000401856 572 ntBASIC4.58□□□□□ -1.68
RHBDL3P58872 RNA5SP146-201ENST00000410743 123 ntBASIC4.58□□□□□ -1.68
RHBDL3P58872 AC107081.1-201ENST00000414975 361 ntBASIC4.58□□□□□ -1.68
RHBDL3P58872 RPL27AP8-201ENST00000424277 446 ntBASIC4.58□□□□□ -1.68
RHBDL3P58872 AC234781.2-201ENST00000426370 994 ntBASIC4.58□□□□□ -1.68
RHBDL3P58872 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.58□□□□□ -1.68
RHBDL3P58872 SNORA71B-202ENST00000439232 272 ntBASIC4.58□□□□□ -1.68
RHBDL3P58872 AL831737.1-201ENST00000441288 271 ntBASIC4.58□□□□□ -1.68
RHBDL3P58872 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.58□□□□□ -1.68
RHBDL3P58872 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.58□□□□□ -1.68
RHBDL3P58872 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.58□□□□□ -1.68
RHBDL3P58872 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.58□□□□□ -1.68
RHBDL3P58872 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.58□□□□□ -1.68
RHBDL3P58872 ARPC3P2-201ENST00000457786 533 ntBASIC4.58□□□□□ -1.68
RHBDL3P58872 AL139824.2-201ENST00000458731 1095 ntBASIC4.58□□□□□ -1.68
RHBDL3P58872 RPL7P15-201ENST00000461190 712 ntBASIC4.58□□□□□ -1.68
RHBDL3P58872 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.58□□□□□ -1.68
RHBDL3P58872 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.58□□□□□ -1.68
RHBDL3P58872 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.58□□□□□ -1.68
RHBDL3P58872 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.58□□□□□ -1.68
RHBDL3P58872 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.58□□□□□ -1.68
RHBDL3P58872 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.58□□□□□ -1.68
RHBDL3P58872 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RHBDL3P58872 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.58□□□□□ -1.68
RHBDL3P58872 AC008751.2-201ENST00000597885 980 ntBASIC4.58□□□□□ -1.68
RHBDL3P58872 Z99289.3-201ENST00000605586 594 ntBASIC4.58□□□□□ -1.68
RHBDL3P58872 AC015813.4-201ENST00000610469 179 ntBASIC4.58□□□□□ -1.68
RHBDL3P58872 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.58□□□□□ -1.68
RHBDL3P58872 AC079684.1-201ENST00000621405 437 ntBASIC4.58□□□□□ -1.68
RHBDL3P58872 AC009268.2-201ENST00000621925 457 ntBASIC4.58□□□□□ -1.68
RHBDL3P58872 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.58□□□□□ -1.68
RHBDL3P58872 AL034408.1-202ENST00000636088 415 ntBASIC4.58□□□□□ -1.68
RHBDL3P58872 AC009093.8-201ENST00000641769 292 ntBASIC4.58□□□□□ -1.68
RHBDL3P58872 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
RHBDL3P58872 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RHBDL3P58872 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RHBDL3P58872 AC005832.2-201ENST00000538921 1430 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 PRO1804-201ENST00000623780 2050 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 RNA5SP295-201ENST00000362655 121 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 RNU6-777P-201ENST00000364265 104 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 RNU6-853P-201ENST00000364306 107 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 RNU6-328P-201ENST00000390887 106 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 U3.20-201ENST00000390909 217 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 RPL7P60-201ENST00000397636 735 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 MTND1P21-201ENST00000412991 285 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.57□□□□□ -1.68
RHBDL3P58872 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.57□□□□□ -1.68
RHBDL3P58872 RPS6P15-201ENST00000431996 751 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 RPL7P28-201ENST00000437739 740 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 LSM1P1-201ENST00000438629 273 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.57□□□□□ -1.68
RHBDL3P58872 AP000542.1-201ENST00000448473 371 ntBASIC4.57□□□□□ -1.68
RHBDL3P58872 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.57□□□□□ -1.68
RHBDL3P58872 VN1R40P-201ENST00000455196 941 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms