Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC007327.1-201ENST00000447461 264 ntBASIC3.47□□□□□ -1.85
PEX3P56589 AL034418.1-201ENST00000448675 860 ntBASIC3.47□□□□□ -1.85
PEX3P56589 AC006539.3-201ENST00000454258 129 ntBASIC3.47□□□□□ -1.85
PEX3P56589 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.47□□□□□ -1.85
PEX3P56589 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.47□□□□□ -1.85
PEX3P56589 AC006445.1-201ENST00000491925 405 ntBASIC3.47□□□□□ -1.85
PEX3P56589 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.47□□□□□ -1.85
PEX3P56589 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.47□□□□□ -1.85
PEX3P56589 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.47□□□□□ -1.85
PEX3P56589 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.47□□□□□ -1.85
PEX3P56589 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.47□□□□□ -1.85
PEX3P56589 RNU1-143P-201ENST00000516296 146 ntBASIC3.47□□□□□ -1.85
PEX3P56589 MRPS36P3-201ENST00000519284 130 ntBASIC3.47□□□□□ -1.85
PEX3P56589 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.47□□□□□ -1.85
PEX3P56589 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.47□□□□□ -1.85
PEX3P56589 IGHV3-76-201ENST00000522465 295 ntBASIC3.47□□□□□ -1.85
PEX3P56589 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PEX3P56589 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.47□□□□□ -1.85
PEX3P56589 MTND4P33-201ENST00000556706 766 ntBASIC3.47□□□□□ -1.85
PEX3P56589 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.47□□□□□ -1.85
PEX3P56589 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.47□□□□□ -1.85
PEX3P56589 AC090695.1-201ENST00000561269 1222 ntBASIC3.47□□□□□ -1.85
PEX3P56589 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.47□□□□□ -1.85
PEX3P56589 AC091057.2-201ENST00000602594 792 ntBASIC3.47□□□□□ -1.85
PEX3P56589 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.47□□□□□ -1.85
PEX3P56589 U1.23-201ENST00000610293 146 ntBASIC3.47□□□□□ -1.85
PEX3P56589 AC092106.3-201ENST00000611308 722 ntBASIC3.47□□□□□ -1.85
PEX3P56589 RNU1-68P-201ENST00000615382 146 ntBASIC3.47□□□□□ -1.85
PEX3P56589 MIR8057-201ENST00000620957 69 ntBASIC3.47□□□□□ -1.85
PEX3P56589 U1.39-201ENST00000621562 146 ntBASIC3.47□□□□□ -1.85
PEX3P56589 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.47□□□□□ -1.85
PEX3P56589 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PEX3P56589 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
PEX3P56589 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PEX3P56589 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PEX3P56589 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.47□□□□□ -1.85
PEX3P56589 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
PEX3P56589 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.46□□□□□ -1.86
PEX3P56589 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.46□□□□□ -1.86
PEX3P56589 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.46□□□□□ -1.86
PEX3P56589 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
PEX3P56589 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.46□□□□□ -1.86
PEX3P56589 NACA3P-201ENST00000359690 648 ntBASIC3.46□□□□□ -1.86
PEX3P56589 RNU6-492P-201ENST00000363035 104 ntBASIC3.46□□□□□ -1.86
PEX3P56589 RNU4-28P-201ENST00000364739 141 ntBASIC3.46□□□□□ -1.86
PEX3P56589 MIR506-201ENST00000384998 124 ntBASIC3.46□□□□□ -1.86
PEX3P56589 SKINT1L-201ENST00000401057 817 ntBASIC3.46□□□□□ -1.86
PEX3P56589 AL450338.1-201ENST00000407987 512 ntBASIC3.46□□□□□ -1.86
PEX3P56589 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.46□□□□□ -1.86
PEX3P56589 AC068533.2-201ENST00000411872 306 ntBASIC3.46□□□□□ -1.86
PEX3P56589 RPS7P13-201ENST00000413955 498 ntBASIC3.46□□□□□ -1.86
PEX3P56589 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.46□□□□□ -1.86
PEX3P56589 RPL22P18-201ENST00000417197 377 ntBASIC3.46□□□□□ -1.86
PEX3P56589 MRPS36P1-201ENST00000421291 307 ntBASIC3.46□□□□□ -1.86
PEX3P56589 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PEX3P56589 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PEX3P56589 AC108734.1-201ENST00000439549 399 ntBASIC3.46□□□□□ -1.86
PEX3P56589 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.46□□□□□ -1.86
PEX3P56589 AC104073.1-201ENST00000451988 151 ntBASIC3.46□□□□□ -1.86
PEX3P56589 OFD1P3Y-201ENST00000453312 783 ntBASIC3.46□□□□□ -1.86
PEX3P56589 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PEX3P56589 RPS3AP43-201ENST00000479743 781 ntBASIC3.46□□□□□ -1.86
PEX3P56589 KLRA1P-201ENST00000503499 986 ntBASIC3.46□□□□□ -1.86
PEX3P56589 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.46□□□□□ -1.86
PEX3P56589 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.46□□□□□ -1.86
PEX3P56589 HIGD1AP3-201ENST00000515857 278 ntBASIC3.46□□□□□ -1.86
PEX3P56589 RNU6-1261P-201ENST00000517194 104 ntBASIC3.46□□□□□ -1.86
PEX3P56589 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.46□□□□□ -1.86
PEX3P56589 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.46□□□□□ -1.86
PEX3P56589 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.46□□□□□ -1.86
PEX3P56589 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.46□□□□□ -1.86
PEX3P56589 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.46□□□□□ -1.86
PEX3P56589 AC005832.3-201ENST00000537929 631 ntBASIC3.46□□□□□ -1.86
PEX3P56589 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PEX3P56589 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.46□□□□□ -1.86
PEX3P56589 GTF2IP8-201ENST00000560687 584 ntBASIC3.46□□□□□ -1.86
PEX3P56589 ZNF192P1-203ENST00000565888 810 ntBASIC3.46□□□□□ -1.86
PEX3P56589 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.46□□□□□ -1.86
PEX3P56589 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.46□□□□□ -1.86
PEX3P56589 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.46□□□□□ -1.86
PEX3P56589 AC021749.1-201ENST00000604322 607 ntBASIC3.46□□□□□ -1.86
PEX3P56589 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.46□□□□□ -1.86
PEX3P56589 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.46□□□□□ -1.86
PEX3P56589 AF127577.6-201ENST00000623352 2191 ntBASIC3.46□□□□□ -1.86
PEX3P56589 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.46□□□□□ -1.86
PEX3P56589 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
PEX3P56589 AL359893.1-201ENST00000447628 1580 ntBASIC3.46□□□□□ -1.86
PEX3P56589 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.45□□□□□ -1.86
PEX3P56589 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.45□□□□□ -1.86
PEX3P56589 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PEX3P56589 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PEX3P56589 Y_RNA.192-201ENST00000363977 102 ntBASIC3.45□□□□□ -1.86
PEX3P56589 RNU6-621P-201ENST00000364752 109 ntBASIC3.45□□□□□ -1.86
PEX3P56589 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.45□□□□□ -1.86
PEX3P56589 RNU6-657P-201ENST00000383904 107 ntBASIC3.45□□□□□ -1.86
PEX3P56589 SNORA70E-201ENST00000384492 135 ntBASIC3.45□□□□□ -1.86
PEX3P56589 MIR491-201ENST00000384877 84 ntBASIC3.45□□□□□ -1.86
PEX3P56589 RPL23AP47-201ENST00000408017 460 ntBASIC3.45□□□□□ -1.86
PEX3P56589 GTF2IP23-201ENST00000423746 351 ntBASIC3.45□□□□□ -1.86
PEX3P56589 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms