Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AL596245.1-201ENST00000618994 362 ntBASIC4.38□□□□□ -1.71
COPAP53621 AC018755.4-201ENST00000619715 454 ntBASIC4.38□□□□□ -1.71
COPAP53621 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
COPAP53621 AC091925.2-201ENST00000625059 256 ntBASIC4.38□□□□□ -1.71
COPAP53621 AL049780.3-201ENST00000624612 1583 ntBASIC4.38□□□□□ -1.71
COPAP53621 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.38□□□□□ -1.71
COPAP53621 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.38□□□□□ -1.71
COPAP53621 AL157700.1-201ENST00000561973 1432 ntBASIC4.38□□□□□ -1.71
COPAP53621 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.37□□□□□ -1.71
COPAP53621 AL133383.2-201ENST00000622958 2336 ntBASIC4.37□□□□□ -1.71
COPAP53621 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.37□□□□□ -1.71
COPAP53621 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.37□□□□□ -1.71
COPAP53621 RNU6-989P-201ENST00000362756 107 ntBASIC4.37□□□□□ -1.71
COPAP53621 RNA5SP307-201ENST00000362863 116 ntBASIC4.37□□□□□ -1.71
COPAP53621 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COPAP53621 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.37□□□□□ -1.71
COPAP53621 RNU6-533P-201ENST00000384144 107 ntBASIC4.37□□□□□ -1.71
COPAP53621 RNA5SP56-201ENST00000410277 118 ntBASIC4.37□□□□□ -1.71
COPAP53621 RNU2-37P-201ENST00000410695 177 ntBASIC4.37□□□□□ -1.71
COPAP53621 RPS23P10-201ENST00000416185 486 ntBASIC4.37□□□□□ -1.71
COPAP53621 Z97055.1-201ENST00000419730 712 ntBASIC4.37□□□□□ -1.71
COPAP53621 AL513174.1-201ENST00000423182 629 ntBASIC4.37□□□□□ -1.71
COPAP53621 AL157831.1-201ENST00000426134 473 ntBASIC4.37□□□□□ -1.71
COPAP53621 MTCO3P30-201ENST00000426425 670 ntBASIC4.37□□□□□ -1.71
COPAP53621 AL356583.2-201ENST00000426536 280 ntBASIC4.37□□□□□ -1.71
COPAP53621 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.37□□□□□ -1.71
COPAP53621 ELOCP18-201ENST00000434209 337 ntBASIC4.37□□□□□ -1.71
COPAP53621 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.37□□□□□ -1.71
COPAP53621 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.37□□□□□ -1.71
COPAP53621 MTCYBP1-201ENST00000454315 1119 ntBASIC4.37□□□□□ -1.71
COPAP53621 RPL9P32-201ENST00000464118 620 ntBASIC4.37□□□□□ -1.71
COPAP53621 RPL35AP15-201ENST00000468042 339 ntBASIC4.37□□□□□ -1.71
COPAP53621 RPS27AP13-201ENST00000498403 237 ntBASIC4.37□□□□□ -1.71
COPAP53621 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.37□□□□□ -1.71
COPAP53621 COX7A2P2-201ENST00000505291 250 ntBASIC4.37□□□□□ -1.71
COPAP53621 AC006390.1-201ENST00000508068 283 ntBASIC4.37□□□□□ -1.71
COPAP53621 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.37□□□□□ -1.71
COPAP53621 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.37□□□□□ -1.71
COPAP53621 AC109464.2-201ENST00000510242 943 ntBASIC4.37□□□□□ -1.71
COPAP53621 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.37□□□□□ -1.71
COPAP53621 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.37□□□□□ -1.71
COPAP53621 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.37□□□□□ -1.71
COPAP53621 TVP23BP1-201ENST00000557500 617 ntBASIC4.37□□□□□ -1.71
COPAP53621 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.37□□□□□ -1.71
COPAP53621 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.37□□□□□ -1.71
COPAP53621 MIR5697-201ENST00000578045 78 ntBASIC4.37□□□□□ -1.71
COPAP53621 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.37□□□□□ -1.71
COPAP53621 AL669831.4-202ENST00000590817 238 ntBASIC4.37□□□□□ -1.71
COPAP53621 AC091805.2-201ENST00000603848 235 ntBASIC4.37□□□□□ -1.71
COPAP53621 Z99129.1-201ENST00000612510 255 ntBASIC4.37□□□□□ -1.71
COPAP53621 AL445363.3-201ENST00000623080 671 ntBASIC4.37□□□□□ -1.71
COPAP53621 AC007546.2-201ENST00000623996 360 ntBASIC4.37□□□□□ -1.71
COPAP53621 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.37□□□□□ -1.71
COPAP53621 CRYM-AS1-204ENST00000637983 556 ntBASIC4.37□□□□□ -1.71
COPAP53621 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COPAP53621 AC092447.10-201ENST00000620607 1652 ntBASIC4.37□□□□□ -1.71
COPAP53621 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.37□□□□□ -1.71
COPAP53621 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
COPAP53621 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COPAP53621 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COPAP53621 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.37□□□□□ -1.71
COPAP53621 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
COPAP53621 AP002001.2-201ENST00000529025 1469 ntBASIC4.37□□□□□ -1.71
COPAP53621 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.36□□□□□ -1.71
COPAP53621 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COPAP53621 AC010300.1-201ENST00000600671 5134 ntBASIC4.36□□□□□ -1.71
COPAP53621 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
COPAP53621 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COPAP53621 SPRR2C-201ENST00000290702 219 ntBASIC4.36□□□□□ -1.71
COPAP53621 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
COPAP53621 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COPAP53621 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COPAP53621 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
COPAP53621 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.36□□□□□ -1.71
COPAP53621 RN7SKP235-201ENST00000410662 305 ntBASIC4.36□□□□□ -1.71
COPAP53621 RNU4-78P-201ENST00000410940 126 ntBASIC4.36□□□□□ -1.71
COPAP53621 HMGN1P14-201ENST00000412459 517 ntBASIC4.36□□□□□ -1.71
COPAP53621 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.36□□□□□ -1.71
COPAP53621 AC127526.1-201ENST00000417526 366 ntBASIC4.36□□□□□ -1.71
COPAP53621 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.36□□□□□ -1.71
COPAP53621 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.36□□□□□ -1.71
COPAP53621 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.36□□□□□ -1.71
COPAP53621 OR8F1P-201ENST00000425243 930 ntBASIC4.36□□□□□ -1.71
COPAP53621 OR5BE1P-201ENST00000425977 939 ntBASIC4.36□□□□□ -1.71
COPAP53621 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.36□□□□□ -1.71
COPAP53621 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COPAP53621 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.36□□□□□ -1.71
COPAP53621 AL512326.1-201ENST00000443050 721 ntBASIC4.36□□□□□ -1.71
COPAP53621 FAM103A2P-201ENST00000444122 354 ntBASIC4.36□□□□□ -1.71
COPAP53621 HSFY6P-201ENST00000445573 403 ntBASIC4.36□□□□□ -1.71
COPAP53621 Z95327.1-201ENST00000446082 482 ntBASIC4.36□□□□□ -1.71
COPAP53621 AL451050.1-201ENST00000450126 415 ntBASIC4.36□□□□□ -1.71
COPAP53621 AL590365.1-201ENST00000450788 243 ntBASIC4.36□□□□□ -1.71
COPAP53621 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.36□□□□□ -1.71
COPAP53621 HMGN2P7-201ENST00000456186 273 ntBASIC4.36□□□□□ -1.71
COPAP53621 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.36□□□□□ -1.71
COPAP53621 OR9M1P-201ENST00000459641 921 ntBASIC4.36□□□□□ -1.71
COPAP53621 BNIP3P41-201ENST00000503774 571 ntBASIC4.36□□□□□ -1.71
COPAP53621 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COPAP53621 RNA5SP519-201ENST00000516480 119 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms