Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.31□□□□□ -1.72
COPB1P53618 AC005726.1-201ENST00000494679 427 ntBASIC4.31□□□□□ -1.72
COPB1P53618 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
COPB1P53618 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.31□□□□□ -1.72
COPB1P53618 AC022447.3-201ENST00000506865 495 ntBASIC4.31□□□□□ -1.72
COPB1P53618 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.31□□□□□ -1.72
COPB1P53618 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
COPB1P53618 SLC25A15P5-201ENST00000508033 253 ntBASIC4.31□□□□□ -1.72
COPB1P53618 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COPB1P53618 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.31□□□□□ -1.72
COPB1P53618 NARSP2-201ENST00000518524 679 ntBASIC4.31□□□□□ -1.72
COPB1P53618 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.31□□□□□ -1.72
COPB1P53618 MED28P5-201ENST00000528254 438 ntBASIC4.31□□□□□ -1.72
COPB1P53618 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.31□□□□□ -1.72
COPB1P53618 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.31□□□□□ -1.72
COPB1P53618 AC008127.2-201ENST00000549925 1075 ntBASIC4.31□□□□□ -1.72
COPB1P53618 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.31□□□□□ -1.72
COPB1P53618 AC087883.1-201ENST00000551882 391 ntBASIC4.31□□□□□ -1.72
COPB1P53618 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.31□□□□□ -1.72
COPB1P53618 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.31□□□□□ -1.72
COPB1P53618 TPRKBP2-201ENST00000565969 475 ntBASIC4.31□□□□□ -1.72
COPB1P53618 AC018552.3-201ENST00000567416 561 ntBASIC4.31□□□□□ -1.72
COPB1P53618 MAGOH2P-202ENST00000584384 429 ntBASIC4.31□□□□□ -1.72
COPB1P53618 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.31□□□□□ -1.72
COPB1P53618 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.31□□□□□ -1.72
COPB1P53618 VN1R85P-201ENST00000601587 426 ntBASIC4.31□□□□□ -1.72
COPB1P53618 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.31□□□□□ -1.72
COPB1P53618 AC098614.4-201ENST00000607601 462 ntBASIC4.31□□□□□ -1.72
COPB1P53618 AC131902.3-201ENST00000611767 581 ntBASIC4.31□□□□□ -1.72
COPB1P53618 AC024941.1-201ENST00000612250 334 ntBASIC4.31□□□□□ -1.72
COPB1P53618 AC091834.1-201ENST00000614543 472 ntBASIC4.31□□□□□ -1.72
COPB1P53618 AC025588.4-201ENST00000615802 908 ntBASIC4.31□□□□□ -1.72
COPB1P53618 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
COPB1P53618 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COPB1P53618 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COPB1P53618 AL022578.1-201ENST00000439330 1433 ntBASIC4.3□□□□□ -1.72
COPB1P53618 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
COPB1P53618 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
COPB1P53618 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COPB1P53618 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COPB1P53618 RPL23AP57-201ENST00000332361 466 ntBASIC4.3□□□□□ -1.72
COPB1P53618 RNU6-289P-201ENST00000364093 107 ntBASIC4.3□□□□□ -1.72
COPB1P53618 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COPB1P53618 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COPB1P53618 AC016769.3-201ENST00000396562 315 ntBASIC4.3□□□□□ -1.72
COPB1P53618 RPL31P52-201ENST00000407532 367 ntBASIC4.3□□□□□ -1.72
COPB1P53618 AL023807.1-201ENST00000407932 359 ntBASIC4.3□□□□□ -1.72
COPB1P53618 MIR320C1-201ENST00000408566 88 ntBASIC4.3□□□□□ -1.72
COPB1P53618 RNU2-21P-201ENST00000410368 188 ntBASIC4.3□□□□□ -1.72
COPB1P53618 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.3□□□□□ -1.72
COPB1P53618 MTND1P23-201ENST00000416931 372 ntBASIC4.3□□□□□ -1.72
COPB1P53618 AL513174.1-201ENST00000423182 629 ntBASIC4.3□□□□□ -1.72
COPB1P53618 AC096632.1-201ENST00000427395 310 ntBASIC4.3□□□□□ -1.72
COPB1P53618 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.3□□□□□ -1.72
COPB1P53618 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COPB1P53618 AL356276.2-201ENST00000435919 558 ntBASIC4.3□□□□□ -1.72
COPB1P53618 TBCAP1-201ENST00000436520 327 ntBASIC4.3□□□□□ -1.72
COPB1P53618 RSU1P2-202ENST00000437884 485 ntBASIC4.3□□□□□ -1.72
COPB1P53618 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.3□□□□□ -1.72
COPB1P53618 MTND1P1-201ENST00000445453 368 ntBASIC4.3□□□□□ -1.72
COPB1P53618 BTF3P5-201ENST00000457252 467 ntBASIC4.3□□□□□ -1.72
COPB1P53618 AC087879.1-201ENST00000474343 374 ntBASIC4.3□□□□□ -1.72
COPB1P53618 MTND6P6-201ENST00000478031 263 ntBASIC4.3□□□□□ -1.72
COPB1P53618 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COPB1P53618 AC004924.1-201ENST00000480160 781 ntBASIC4.3□□□□□ -1.72
COPB1P53618 AC105137.1-201ENST00000484355 562 ntBASIC4.3□□□□□ -1.72
COPB1P53618 AL132838.2-201ENST00000492041 314 ntBASIC4.3□□□□□ -1.72
COPB1P53618 AC106872.3-201ENST00000495104 446 ntBASIC4.3□□□□□ -1.72
COPB1P53618 AC090453.1-201ENST00000495560 436 ntBASIC4.3□□□□□ -1.72
COPB1P53618 AC105252.1-201ENST00000503089 286 ntBASIC4.3□□□□□ -1.72
COPB1P53618 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.3□□□□□ -1.72
COPB1P53618 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.3□□□□□ -1.72
COPB1P53618 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.3□□□□□ -1.72
COPB1P53618 AC087369.1-201ENST00000520775 996 ntBASIC4.3□□□□□ -1.72
COPB1P53618 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.3□□□□□ -1.72
COPB1P53618 AC022878.1-201ENST00000530684 149 ntBASIC4.3□□□□□ -1.72
COPB1P53618 CYCSP29-201ENST00000533731 318 ntBASIC4.3□□□□□ -1.72
COPB1P53618 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.3□□□□□ -1.72
COPB1P53618 AC091516.1-201ENST00000549191 703 ntBASIC4.3□□□□□ -1.72
COPB1P53618 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.3□□□□□ -1.72
COPB1P53618 LSM6P2-201ENST00000552208 177 ntBASIC4.3□□□□□ -1.72
COPB1P53618 AC090877.1-201ENST00000561418 344 ntBASIC4.3□□□□□ -1.72
COPB1P53618 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.3□□□□□ -1.72
COPB1P53618 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.3□□□□□ -1.72
COPB1P53618 MIR3138-201ENST00000585238 82 ntBASIC4.3□□□□□ -1.72
COPB1P53618 OR4G1P-201ENST00000588632 938 ntBASIC4.3□□□□□ -1.72
COPB1P53618 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.3□□□□□ -1.72
COPB1P53618 AC109347.2-201ENST00000610220 349 ntBASIC4.3□□□□□ -1.72
COPB1P53618 AC022306.2-201ENST00000617563 647 ntBASIC4.3□□□□□ -1.72
COPB1P53618 ZYXP1-201ENST00000617638 118 ntBASIC4.3□□□□□ -1.72
COPB1P53618 MIR6864-201ENST00000617935 70 ntBASIC4.3□□□□□ -1.72
COPB1P53618 AC068722.2-201ENST00000618734 544 ntBASIC4.3□□□□□ -1.72
COPB1P53618 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.3□□□□□ -1.72
COPB1P53618 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.3□□□□□ -1.72
COPB1P53618 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.3□□□□□ -1.72
COPB1P53618 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
COPB1P53618 AL356489.2-201ENST00000566968 3528 ntBASIC4.3□□□□□ -1.72
COPB1P53618 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
COPB1P53618 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COPB1P53618 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms