Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.85□□□□□ -1.79
CENPAP49450 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.85□□□□□ -1.79
CENPAP49450 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.85□□□□□ -1.79
CENPAP49450 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.85□□□□□ -1.79
CENPAP49450 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.85□□□□□ -1.79
CENPAP49450 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.85□□□□□ -1.79
CENPAP49450 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.85□□□□□ -1.79
CENPAP49450 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.85□□□□□ -1.79
CENPAP49450 AC079089.3-201ENST00000603094 673 ntBASIC3.85□□□□□ -1.79
CENPAP49450 AC004853.1-201ENST00000604902 698 ntBASIC3.85□□□□□ -1.79
CENPAP49450 AL451086.1-201ENST00000605596 223 ntBASIC3.85□□□□□ -1.79
CENPAP49450 AC138932.5-201ENST00000617759 563 ntBASIC3.85□□□□□ -1.79
CENPAP49450 uc_338.13-201ENST00000618243 179 ntBASIC3.85□□□□□ -1.79
CENPAP49450 AL590240.3-201ENST00000621416 943 ntBASIC3.85□□□□□ -1.79
CENPAP49450 AC008785.1-201ENST00000624475 456 ntBASIC3.85□□□□□ -1.79
CENPAP49450 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CENPAP49450 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CENPAP49450 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.85□□□□□ -1.79
CENPAP49450 DHX40P1-201ENST00000588725 1412 ntBASIC3.85□□□□□ -1.79
CENPAP49450 TEX21P-201ENST00000447107 1476 ntBASIC3.85□□□□□ -1.79
CENPAP49450 CCT4P2-201ENST00000233836 1548 ntBASIC3.85□□□□□ -1.79
CENPAP49450 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CENPAP49450 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CENPAP49450 AC018555.1-201ENST00000567548 1980 ntBASIC3.84□□□□□ -1.79
CENPAP49450 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CENPAP49450 MIR331-201ENST00000362302 94 ntBASIC3.84□□□□□ -1.79
CENPAP49450 RNY4P24-201ENST00000362735 96 ntBASIC3.84□□□□□ -1.79
CENPAP49450 SNORA75-201ENST00000384158 137 ntBASIC3.84□□□□□ -1.79
CENPAP49450 RNU6-1119P-201ENST00000384349 108 ntBASIC3.84□□□□□ -1.79
CENPAP49450 MIR591-201ENST00000385290 95 ntBASIC3.84□□□□□ -1.79
CENPAP49450 SNORA40.3-201ENST00000390964 122 ntBASIC3.84□□□□□ -1.79
CENPAP49450 AL049693.1-201ENST00000402760 611 ntBASIC3.84□□□□□ -1.79
CENPAP49450 USP9YP13-201ENST00000417797 480 ntBASIC3.84□□□□□ -1.79
CENPAP49450 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.84□□□□□ -1.79
CENPAP49450 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.84□□□□□ -1.79
CENPAP49450 HMGB1P12-201ENST00000438594 598 ntBASIC3.84□□□□□ -1.79
CENPAP49450 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.84□□□□□ -1.79
CENPAP49450 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.84□□□□□ -1.79
CENPAP49450 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.84□□□□□ -1.79
CENPAP49450 AC099563.1-201ENST00000456086 418 ntBASIC3.84□□□□□ -1.79
CENPAP49450 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CENPAP49450 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.84□□□□□ -1.79
CENPAP49450 AC108064.1-201ENST00000513791 460 ntBASIC3.84□□□□□ -1.79
CENPAP49450 PAICSP4-201ENST00000517543 1253 ntBASIC3.84□□□□□ -1.79
CENPAP49450 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CENPAP49450 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.84□□□□□ -1.79
CENPAP49450 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.84□□□□□ -1.79
CENPAP49450 EEF1B2P4-201ENST00000551398 348 ntBASIC3.84□□□□□ -1.79
CENPAP49450 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.84□□□□□ -1.79
CENPAP49450 AL109766.1-201ENST00000555080 552 ntBASIC3.84□□□□□ -1.79
CENPAP49450 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.84□□□□□ -1.79
CENPAP49450 AC084783.1-201ENST00000565846 910 ntBASIC3.84□□□□□ -1.79
CENPAP49450 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.84□□□□□ -1.79
CENPAP49450 AC005951.1-201ENST00000576706 485 ntBASIC3.84□□□□□ -1.79
CENPAP49450 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.84□□□□□ -1.79
CENPAP49450 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
CENPAP49450 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.84□□□□□ -1.79
CENPAP49450 AC068790.2-201ENST00000602601 557 ntBASIC3.84□□□□□ -1.79
CENPAP49450 AC112191.3-201ENST00000604371 277 ntBASIC3.84□□□□□ -1.79
CENPAP49450 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CENPAP49450 AC024940.4-201ENST00000605507 246 ntBASIC3.84□□□□□ -1.79
CENPAP49450 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.84□□□□□ -1.79
CENPAP49450 AC008250.2-201ENST00000615261 205 ntBASIC3.84□□□□□ -1.79
CENPAP49450 AC009509.4-201ENST00000619202 509 ntBASIC3.84□□□□□ -1.79
CENPAP49450 AC099842.1-201ENST00000619919 596 ntBASIC3.84□□□□□ -1.79
CENPAP49450 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.84□□□□□ -1.79
CENPAP49450 AC084035.1-201ENST00000634543 607 ntBASIC3.84□□□□□ -1.79
CENPAP49450 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
CENPAP49450 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.84□□□□□ -1.8
CENPAP49450 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.84□□□□□ -1.8
CENPAP49450 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
CENPAP49450 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CENPAP49450 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CENPAP49450 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CENPAP49450 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
CENPAP49450 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CENPAP49450 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CENPAP49450 OR5P1P-201ENST00000299512 925 ntBASIC3.83□□□□□ -1.8
CENPAP49450 SNORA7.2-201ENST00000364446 145 ntBASIC3.83□□□□□ -1.8
CENPAP49450 SNORD51-201ENST00000384320 80 ntBASIC3.83□□□□□ -1.8
CENPAP49450 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.83□□□□□ -1.8
CENPAP49450 AC245052.5-201ENST00000416320 649 ntBASIC3.83□□□□□ -1.8
CENPAP49450 AC091862.1-201ENST00000438016 1100 ntBASIC3.83□□□□□ -1.8
CENPAP49450 SNORA71B-202ENST00000439232 272 ntBASIC3.83□□□□□ -1.8
CENPAP49450 RPL23AP89-201ENST00000439324 255 ntBASIC3.83□□□□□ -1.8
CENPAP49450 PHBP16-201ENST00000446318 950 ntBASIC3.83□□□□□ -1.8
CENPAP49450 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.83□□□□□ -1.8
CENPAP49450 AL033528.1-201ENST00000453780 140 ntBASIC3.83□□□□□ -1.8
CENPAP49450 RPL23AP81-201ENST00000455252 467 ntBASIC3.83□□□□□ -1.8
CENPAP49450 DHFRP3-201ENST00000455595 559 ntBASIC3.83□□□□□ -1.8
CENPAP49450 ST13P14-201ENST00000474095 734 ntBASIC3.83□□□□□ -1.8
CENPAP49450 AC006517.1-201ENST00000480485 328 ntBASIC3.83□□□□□ -1.8
CENPAP49450 RPS4XP13-201ENST00000483219 789 ntBASIC3.83□□□□□ -1.8
CENPAP49450 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CENPAP49450 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.83□□□□□ -1.8
CENPAP49450 MTCO2P32-201ENST00000514865 403 ntBASIC3.83□□□□□ -1.8
CENPAP49450 RN7SKP92-201ENST00000517266 244 ntBASIC3.83□□□□□ -1.8
CENPAP49450 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CENPAP49450 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.83□□□□□ -1.8
CENPAP49450 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms