Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 SNORA70.24-201ENST00000517233 118 ntBASIC2.94□□□□□ -1.94
RFX3P48380 RNU6-711P-201ENST00000517255 106 ntBASIC2.94□□□□□ -1.94
RFX3P48380 AC022690.1-201ENST00000526681 550 ntBASIC2.94□□□□□ -1.94
RFX3P48380 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.94□□□□□ -1.94
RFX3P48380 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.94□□□□□ -1.94
RFX3P48380 RPL21P12-201ENST00000559810 515 ntBASIC2.94□□□□□ -1.94
RFX3P48380 ZNF971P-201ENST00000562068 1249 ntBASIC2.94□□□□□ -1.94
RFX3P48380 MIR4666A-201ENST00000580160 79 ntBASIC2.94□□□□□ -1.94
RFX3P48380 RPAP2P1-201ENST00000603626 1168 ntBASIC2.94□□□□□ -1.94
RFX3P48380 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RFX3P48380 AC008083.4-201ENST00000615076 444 ntBASIC2.94□□□□□ -1.94
RFX3P48380 AC006249.1-201ENST00000621223 471 ntBASIC2.94□□□□□ -1.94
RFX3P48380 AL353748.2-201ENST00000622148 471 ntBASIC2.94□□□□□ -1.94
RFX3P48380 AC091925.2-201ENST00000625059 256 ntBASIC2.94□□□□□ -1.94
RFX3P48380 AC006927.2-201ENST00000639256 389 ntBASIC2.94□□□□□ -1.94
RFX3P48380 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
RFX3P48380 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
RFX3P48380 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RFX3P48380 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.93□□□□□ -1.94
RFX3P48380 MTND5P19-201ENST00000424872 1794 ntBASIC2.93□□□□□ -1.94
RFX3P48380 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RFX3P48380 RNU5B-1-201ENST00000363286 116 ntBASIC2.93□□□□□ -1.94
RFX3P48380 RNA5SP267-201ENST00000364893 126 ntBASIC2.93□□□□□ -1.94
RFX3P48380 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.93□□□□□ -1.94
RFX3P48380 SNORA9-201ENST00000384215 133 ntBASIC2.93□□□□□ -1.94
RFX3P48380 RPL17P50-201ENST00000396131 546 ntBASIC2.93□□□□□ -1.94
RFX3P48380 AC016769.3-201ENST00000396562 315 ntBASIC2.93□□□□□ -1.94
RFX3P48380 RNU6-1077P-201ENST00000410506 102 ntBASIC2.93□□□□□ -1.94
RFX3P48380 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.93□□□□□ -1.94
RFX3P48380 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.93□□□□□ -1.94
RFX3P48380 SDCBPP3-201ENST00000419629 891 ntBASIC2.93□□□□□ -1.94
RFX3P48380 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.93□□□□□ -1.94
RFX3P48380 RPL21P40-201ENST00000428586 483 ntBASIC2.93□□□□□ -1.94
RFX3P48380 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.93□□□□□ -1.94
RFX3P48380 MTCYBP15-201ENST00000433123 1127 ntBASIC2.93□□□□□ -1.94
RFX3P48380 AC093392.2-201ENST00000450682 337 ntBASIC2.93□□□□□ -1.94
RFX3P48380 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.93□□□□□ -1.94
RFX3P48380 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.93□□□□□ -1.94
RFX3P48380 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.93□□□□□ -1.94
RFX3P48380 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.93□□□□□ -1.94
RFX3P48380 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.93□□□□□ -1.94
RFX3P48380 RN7SL863P-201ENST00000462370 296 ntBASIC2.93□□□□□ -1.94
RFX3P48380 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.93□□□□□ -1.94
RFX3P48380 ST13P14-201ENST00000474095 734 ntBASIC2.93□□□□□ -1.94
RFX3P48380 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.93□□□□□ -1.94
RFX3P48380 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.93□□□□□ -1.94
RFX3P48380 AC016550.1-201ENST00000505348 785 ntBASIC2.93□□□□□ -1.94
RFX3P48380 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.93□□□□□ -1.94
RFX3P48380 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RFX3P48380 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.93□□□□□ -1.94
RFX3P48380 AC018630.1-201ENST00000541376 925 ntBASIC2.93□□□□□ -1.94
RFX3P48380 EEF1B2P4-201ENST00000551398 348 ntBASIC2.93□□□□□ -1.94
RFX3P48380 MIR5680-201ENST00000577577 84 ntBASIC2.93□□□□□ -1.94
RFX3P48380 FAM60BP-201ENST00000578364 658 ntBASIC2.93□□□□□ -1.94
RFX3P48380 MIR2682-201ENST00000580305 110 ntBASIC2.93□□□□□ -1.94
RFX3P48380 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.93□□□□□ -1.94
RFX3P48380 AL031985.2-201ENST00000600955 480 ntBASIC2.93□□□□□ -1.94
RFX3P48380 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.93□□□□□ -1.94
RFX3P48380 AL161756.2-201ENST00000604597 246 ntBASIC2.93□□□□□ -1.94
RFX3P48380 MFSD8-245ENST00000641743 948 ntBASIC2.93□□□□□ -1.94
RFX3P48380 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.93□□□□□ -1.94
RFX3P48380 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RFX3P48380 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.93□□□□□ -1.94
RFX3P48380 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RFX3P48380 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.92□□□□□ -1.94
RFX3P48380 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RFX3P48380 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
RFX3P48380 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.92□□□□□ -1.94
RFX3P48380 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RFX3P48380 RNU6-236P-201ENST00000363886 106 ntBASIC2.92□□□□□ -1.94
RFX3P48380 SNORA51.4-201ENST00000364993 124 ntBASIC2.92□□□□□ -1.94
RFX3P48380 MIR491-201ENST00000384877 84 ntBASIC2.92□□□□□ -1.94
RFX3P48380 SNORA40.4-201ENST00000390971 128 ntBASIC2.92□□□□□ -1.94
RFX3P48380 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RFX3P48380 AL024474.1-201ENST00000404655 591 ntBASIC2.92□□□□□ -1.94
RFX3P48380 RNA5SP120-201ENST00000410900 112 ntBASIC2.92□□□□□ -1.94
RFX3P48380 MTATP6P19-201ENST00000413797 659 ntBASIC2.92□□□□□ -1.94
RFX3P48380 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.92□□□□□ -1.94
RFX3P48380 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.92□□□□□ -1.94
RFX3P48380 AC099677.1-201ENST00000420575 175 ntBASIC2.92□□□□□ -1.94
RFX3P48380 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.92□□□□□ -1.94
RFX3P48380 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.92□□□□□ -1.94
RFX3P48380 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.92□□□□□ -1.94
RFX3P48380 AC244505.4-201ENST00000434905 287 ntBASIC2.92□□□□□ -1.94
RFX3P48380 AC108734.1-201ENST00000439549 399 ntBASIC2.92□□□□□ -1.94
RFX3P48380 SSXP5-201ENST00000443473 287 ntBASIC2.92□□□□□ -1.94
RFX3P48380 Z75741.1-201ENST00000446793 314 ntBASIC2.92□□□□□ -1.94
RFX3P48380 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.92□□□□□ -1.94
RFX3P48380 AC140076.1-201ENST00000449897 361 ntBASIC2.92□□□□□ -1.94
RFX3P48380 RPL36AP33-201ENST00000450395 310 ntBASIC2.92□□□□□ -1.94
RFX3P48380 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.92□□□□□ -1.94
RFX3P48380 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.92□□□□□ -1.94
RFX3P48380 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.92□□□□□ -1.94
RFX3P48380 RPL23AP31-201ENST00000456160 467 ntBASIC2.92□□□□□ -1.94
RFX3P48380 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.92□□□□□ -1.94
RFX3P48380 RN7SL75P-201ENST00000461926 281 ntBASIC2.92□□□□□ -1.94
RFX3P48380 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.92□□□□□ -1.94
RFX3P48380 MLLT10P2-201ENST00000506434 249 ntBASIC2.92□□□□□ -1.94
RFX3P48380 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.92□□□□□ -1.94
RFX3P48380 CBX3P3-201ENST00000508108 532 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms