Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC241584.1-201ENST00000438469 1241 ntBASIC3.04□□□□□ -1.92
SHMT2P34897 AC108734.1-201ENST00000439549 399 ntBASIC3.04□□□□□ -1.92
SHMT2P34897 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.04□□□□□ -1.92
SHMT2P34897 NPM1P13-201ENST00000452663 865 ntBASIC3.04□□□□□ -1.92
SHMT2P34897 PABPC1P3-201ENST00000469174 459 ntBASIC3.04□□□□□ -1.92
SHMT2P34897 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SHMT2P34897 AC006445.1-201ENST00000491925 405 ntBASIC3.04□□□□□ -1.92
SHMT2P34897 AC084024.2-201ENST00000503480 791 ntBASIC3.04□□□□□ -1.92
SHMT2P34897 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.04□□□□□ -1.92
SHMT2P34897 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.04□□□□□ -1.92
SHMT2P34897 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.04□□□□□ -1.92
SHMT2P34897 SNORA48.10-201ENST00000516965 160 ntBASIC3.04□□□□□ -1.92
SHMT2P34897 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.04□□□□□ -1.92
SHMT2P34897 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SHMT2P34897 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.04□□□□□ -1.92
SHMT2P34897 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.04□□□□□ -1.92
SHMT2P34897 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.04□□□□□ -1.92
SHMT2P34897 AC124312.4-201ENST00000605533 310 ntBASIC3.04□□□□□ -1.92
SHMT2P34897 AL049777.1-201ENST00000622740 518 ntBASIC3.04□□□□□ -1.92
SHMT2P34897 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.04□□□□□ -1.92
SHMT2P34897 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.04□□□□□ -1.92
SHMT2P34897 AC103988.1-201ENST00000566382 2177 ntBASIC3.04□□□□□ -1.92
SHMT2P34897 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SHMT2P34897 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SHMT2P34897 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SHMT2P34897 RNA5SP374-201ENST00000362939 125 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 RNU6-657P-201ENST00000383904 107 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 RNU6-629P-201ENST00000384061 103 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 SNORA9-201ENST00000384215 133 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 RNU6-298P-201ENST00000390888 96 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 EIF5P1-201ENST00000400019 1231 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 RPL7P25-201ENST00000404151 721 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 AL133384.1-201ENST00000412744 351 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.03□□□□□ -1.92
SHMT2P34897 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.03□□□□□ -1.92
SHMT2P34897 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.03□□□□□ -1.92
SHMT2P34897 RPS6P14-201ENST00000425165 719 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 OR2AS1P-201ENST00000427827 319 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 AC011242.1-201ENST00000433596 1158 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.03□□□□□ -1.92
SHMT2P34897 UQCRHP3-201ENST00000451503 251 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 ARPC3P2-201ENST00000457786 533 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 AC012181.1-201ENST00000479895 423 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.03□□□□□ -1.92
SHMT2P34897 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.03□□□□□ -1.92
SHMT2P34897 HMGB1P22-201ENST00000505315 124 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.03□□□□□ -1.92
SHMT2P34897 AC093752.1-206ENST00000511823 336 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.03□□□□□ -1.92
SHMT2P34897 AP004371.1-201ENST00000525240 214 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.03□□□□□ -1.92
SHMT2P34897 DEFB130C-202ENST00000530001 230 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.03□□□□□ -1.92
SHMT2P34897 UBL5P2-201ENST00000583788 219 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 AL606834.3-201ENST00000602615 496 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 AL445435.1-201ENST00000604232 665 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.03□□□□□ -1.92
SHMT2P34897 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 AC009318.4-201ENST00000620496 486 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 AL157770.1-201ENST00000623049 439 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 AP003485.1-201ENST00000625093 753 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SHMT2P34897 MFSD8-245ENST00000641743 948 ntBASIC3.03□□□□□ -1.92
SHMT2P34897 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
SHMT2P34897 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.93
SHMT2P34897 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SHMT2P34897 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SHMT2P34897 MTND5P19-201ENST00000424872 1794 ntBASIC3.02□□□□□ -1.93
SHMT2P34897 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SHMT2P34897 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.02□□□□□ -1.93
SHMT2P34897 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SHMT2P34897 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SHMT2P34897 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.02□□□□□ -1.93
SHMT2P34897 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SHMT2P34897 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.02□□□□□ -1.93
SHMT2P34897 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.02□□□□□ -1.93
SHMT2P34897 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SHMT2P34897 SUGT1P1-201ENST00000379514 476 ntBASIC3.02□□□□□ -1.93
SHMT2P34897 AL121972.1-201ENST00000402023 252 ntBASIC3.02□□□□□ -1.93
SHMT2P34897 AL138880.1-201ENST00000405824 642 ntBASIC3.02□□□□□ -1.93
SHMT2P34897 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.02□□□□□ -1.93
SHMT2P34897 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.02□□□□□ -1.93
SHMT2P34897 LUZP4P1-201ENST00000415420 344 ntBASIC3.02□□□□□ -1.93
SHMT2P34897 AC245054.2-201ENST00000415639 319 ntBASIC3.02□□□□□ -1.93
SHMT2P34897 AC006548.1-201ENST00000427470 102 ntBASIC3.02□□□□□ -1.93
SHMT2P34897 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.02□□□□□ -1.93
SHMT2P34897 AC244505.4-201ENST00000434905 287 ntBASIC3.02□□□□□ -1.93
SHMT2P34897 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.02□□□□□ -1.93
SHMT2P34897 AL662791.1-201ENST00000441992 928 ntBASIC3.02□□□□□ -1.93
SHMT2P34897 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.02□□□□□ -1.93
SHMT2P34897 SSXP5-201ENST00000443473 287 ntBASIC3.02□□□□□ -1.93
SHMT2P34897 ST13P14-201ENST00000474095 734 ntBASIC3.02□□□□□ -1.93
SHMT2P34897 RPS27AP1-201ENST00000475545 471 ntBASIC3.02□□□□□ -1.93
SHMT2P34897 RPL23AP55-201ENST00000498163 452 ntBASIC3.02□□□□□ -1.93
SHMT2P34897 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.02□□□□□ -1.93
SHMT2P34897 BOLA3P3-201ENST00000505182 232 ntBASIC3.02□□□□□ -1.93
SHMT2P34897 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.02□□□□□ -1.93
SHMT2P34897 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
SHMT2P34897 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.02□□□□□ -1.93
SHMT2P34897 MTCYBP27-201ENST00000555160 670 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms