Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.54□□□□□ -2
COL4A5P29400 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.54□□□□□ -2
COL4A5P29400 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.54□□□□□ -2
COL4A5P29400 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.54□□□□□ -2
COL4A5P29400 SNRPGP9-201ENST00000456025 225 ntBASIC2.54□□□□□ -2
COL4A5P29400 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.54□□□□□ -2
COL4A5P29400 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.54□□□□□ -2
COL4A5P29400 SMARCE1P4-201ENST00000523647 241 ntBASIC2.54□□□□□ -2
COL4A5P29400 AC110588.1-201ENST00000559699 137 ntBASIC2.54□□□□□ -2
COL4A5P29400 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.54□□□□□ -2
COL4A5P29400 AC093673.2-201ENST00000609674 331 ntBASIC2.54□□□□□ -2
COL4A5P29400 AC004520.1-201ENST00000608362 1413 ntBASIC2.54□□□□□ -2
COL4A5P29400 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.54□□□□□ -2
COL4A5P29400 U8.8-201ENST00000365399 135 ntBASIC2.53□□□□□ -2
COL4A5P29400 AL354719.1-201ENST00000406535 843 ntBASIC2.53□□□□□ -2
COL4A5P29400 SEC63P1-201ENST00000425785 1258 ntBASIC2.53□□□□□ -2
COL4A5P29400 MTCO3P21-201ENST00000430791 643 ntBASIC2.53□□□□□ -2
COL4A5P29400 RPS26P30-201ENST00000443431 335 ntBASIC2.53□□□□□ -2
COL4A5P29400 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
COL4A5P29400 OR6C72P-201ENST00000451403 892 ntBASIC2.53□□□□□ -2
COL4A5P29400 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.53□□□□□ -2
COL4A5P29400 TRBV26-201ENST00000456572 344 ntBASIC2.53□□□□□ -2
COL4A5P29400 AC068305.1-201ENST00000497406 726 ntBASIC2.53□□□□□ -2
COL4A5P29400 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.53□□□□□ -2
COL4A5P29400 MTCYBP19-201ENST00000517463 1124 ntBASIC2.53□□□□□ -2
COL4A5P29400 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC2.53□□□□□ -2
COL4A5P29400 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.53□□□□□ -2
COL4A5P29400 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
COL4A5P29400 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
COL4A5P29400 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
COL4A5P29400 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
COL4A5P29400 MTCYBP7-201ENST00000419540 1134 ntBASIC2.53□□□□□ -2
COL4A5P29400 AC073464.3-201ENST00000422564 712 ntBASIC2.53□□□□□ -2
COL4A5P29400 MUPP-201ENST00000438111 566 ntBASIC2.53□□□□□ -2
COL4A5P29400 AL162388.1-201ENST00000450912 352 ntBASIC2.53□□□□□ -2
COL4A5P29400 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.53□□□□□ -2
COL4A5P29400 AC068714.1-201ENST00000559623 800 ntBASIC2.53□□□□□ -2
COL4A5P29400 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
COL4A5P29400 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC2.53□□□□□ -2
COL4A5P29400 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.53□□□□□ -2
COL4A5P29400 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
COL4A5P29400 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
COL4A5P29400 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2.01
COL4A5P29400 AC009487.4-201ENST00000624969 3585 ntBASIC2.52□□□□□ -2.01
COL4A5P29400 AC010329.2-201ENST00000595195 2737 ntBASIC2.52□□□□□ -2.01
COL4A5P29400 MTND4P35-201ENST00000604257 1375 ntBASIC2.52□□□□□ -2.01
COL4A5P29400 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
COL4A5P29400 SNORD13-201ENST00000459299 104 ntBASIC2.52□□□□□ -2.01
COL4A5P29400 AC113398.2-201ENST00000507630 558 ntBASIC2.52□□□□□ -2.01
COL4A5P29400 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.52□□□□□ -2.01
COL4A5P29400 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.52□□□□□ -2.01
COL4A5P29400 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.52□□□□□ -2.01
COL4A5P29400 OR4R2P-201ENST00000530815 597 ntBASIC2.52□□□□□ -2.01
COL4A5P29400 AC008083.2-201ENST00000546707 476 ntBASIC2.52□□□□□ -2.01
COL4A5P29400 AMZ2P1-203ENST00000565833 850 ntBASIC2.52□□□□□ -2.01
COL4A5P29400 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.52□□□□□ -2.01
COL4A5P29400 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
COL4A5P29400 CFTRP2-201ENST00000634304 199 ntBASIC2.52□□□□□ -2.01
COL4A5P29400 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.52□□□□□ -2.01
COL4A5P29400 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
COL4A5P29400 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
COL4A5P29400 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.51□□□□□ -2.01
COL4A5P29400 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
COL4A5P29400 MTCO3P31-201ENST00000405526 789 ntBASIC2.51□□□□□ -2.01
COL4A5P29400 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.51□□□□□ -2.01
COL4A5P29400 AC009969.1-201ENST00000438726 172 ntBASIC2.51□□□□□ -2.01
COL4A5P29400 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.51□□□□□ -2.01
COL4A5P29400 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
COL4A5P29400 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.51□□□□□ -2.01
COL4A5P29400 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.51□□□□□ -2.01
COL4A5P29400 AC006116.7-201ENST00000590141 756 ntBASIC2.51□□□□□ -2.01
COL4A5P29400 CYP3A51P-201ENST00000633513 256 ntBASIC2.51□□□□□ -2.01
COL4A5P29400 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
COL4A5P29400 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
COL4A5P29400 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.5□□□□□ -2.01
COL4A5P29400 RNU6-457P-201ENST00000363999 107 ntBASIC2.5□□□□□ -2.01
COL4A5P29400 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL4A5P29400 RNU1-138P-201ENST00000384093 164 ntBASIC2.5□□□□□ -2.01
COL4A5P29400 MIR92A2-201ENST00000385299 75 ntBASIC2.5□□□□□ -2.01
COL4A5P29400 LUZP4P1-201ENST00000415420 344 ntBASIC2.5□□□□□ -2.01
COL4A5P29400 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
COL4A5P29400 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.5□□□□□ -2.01
COL4A5P29400 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.5□□□□□ -2.01
COL4A5P29400 TAF9P1-201ENST00000445421 515 ntBASIC2.5□□□□□ -2.01
COL4A5P29400 TAF9P2-201ENST00000454958 515 ntBASIC2.5□□□□□ -2.01
COL4A5P29400 AC233279.1-201ENST00000455300 423 ntBASIC2.5□□□□□ -2.01
COL4A5P29400 RNU6-1218P-201ENST00000458990 108 ntBASIC2.5□□□□□ -2.01
COL4A5P29400 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.5□□□□□ -2.01
COL4A5P29400 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.5□□□□□ -2.01
COL4A5P29400 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.5□□□□□ -2.01
COL4A5P29400 OR4H12P-201ENST00000556269 907 ntBASIC2.5□□□□□ -2.01
COL4A5P29400 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.5□□□□□ -2.01
COL4A5P29400 VN1R80P-201ENST00000597126 338 ntBASIC2.5□□□□□ -2.01
COL4A5P29400 AL160237.3-201ENST00000604114 1013 ntBASIC2.5□□□□□ -2.01
COL4A5P29400 AL359198.2-201ENST00000611836 194 ntBASIC2.5□□□□□ -2.01
COL4A5P29400 Y_RNA.783-201ENST00000613546 102 ntBASIC2.5□□□□□ -2.01
COL4A5P29400 AC002064.3-201ENST00000623448 346 ntBASIC2.5□□□□□ -2.01
COL4A5P29400 Y_RNA.122-201ENST00000363331 96 ntBASIC2.5□□□□□ -2.01
COL4A5P29400 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.5□□□□□ -2.01
COL4A5P29400 RPS6P12-201ENST00000432491 726 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms