Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AC105429.2-201ENST00000610567 517 ntBASIC4.15□□□□□ -1.75
EPHA3P29320 AL021997.2-201ENST00000615674 271 ntBASIC4.15□□□□□ -1.75
EPHA3P29320 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.15□□□□□ -1.75
EPHA3P29320 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.15□□□□□ -1.75
EPHA3P29320 MIR6715B-201ENST00000637172 77 ntBASIC4.15□□□□□ -1.75
EPHA3P29320 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
EPHA3P29320 AC011460.1-201ENST00000636268 1834 ntBASIC4.15□□□□□ -1.75
EPHA3P29320 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
EPHA3P29320 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.15□□□□□ -1.75
EPHA3P29320 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
EPHA3P29320 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
EPHA3P29320 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
EPHA3P29320 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.15□□□□□ -1.75
EPHA3P29320 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
EPHA3P29320 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
EPHA3P29320 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
EPHA3P29320 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
EPHA3P29320 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.14□□□□□ -1.75
EPHA3P29320 OR4K15-201ENST00000305051 1216 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
EPHA3P29320 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
EPHA3P29320 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
EPHA3P29320 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
EPHA3P29320 RNA5SP175-201ENST00000364275 119 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 RNU6-282P-201ENST00000365357 103 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
EPHA3P29320 RNU6-821P-201ENST00000390995 107 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 RNU6-780P-201ENST00000391030 104 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 MIR298-201ENST00000401212 88 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 AL078595.1-201ENST00000404458 226 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.14□□□□□ -1.75
EPHA3P29320 RNU2-47P-201ENST00000410649 186 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 RNU2-8P-201ENST00000410727 190 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.14□□□□□ -1.75
EPHA3P29320 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.14□□□□□ -1.75
EPHA3P29320 AC092447.6-201ENST00000414578 210 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.14□□□□□ -1.75
EPHA3P29320 MTND3P17-201ENST00000416968 344 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.14□□□□□ -1.75
EPHA3P29320 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.14□□□□□ -1.75
EPHA3P29320 RPL7AP25-201ENST00000423357 805 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.14□□□□□ -1.75
EPHA3P29320 AC007283.2-201ENST00000424739 197 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 AC006548.1-201ENST00000427470 102 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 RPS27AP12-201ENST00000429552 465 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.14□□□□□ -1.75
EPHA3P29320 AC006466.1-201ENST00000438721 289 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 RBMX2P4-201ENST00000441256 376 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 USP9YP15-201ENST00000442391 422 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.14□□□□□ -1.75
EPHA3P29320 AL590399.6-201ENST00000446396 307 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 MTND4P18-201ENST00000447010 465 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 DHFRP3-201ENST00000455595 559 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.14□□□□□ -1.75
EPHA3P29320 AL672167.3-201ENST00000465951 960 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
EPHA3P29320 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.14□□□□□ -1.75
EPHA3P29320 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.14□□□□□ -1.75
EPHA3P29320 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.14□□□□□ -1.75
EPHA3P29320 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.14□□□□□ -1.75
EPHA3P29320 HMGB1P29-201ENST00000505659 499 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 VWA8P1-201ENST00000510889 176 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 PTGES3P3-201ENST00000511479 482 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 AP000827.1-201ENST00000527814 258 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
EPHA3P29320 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.14□□□□□ -1.75
EPHA3P29320 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.14□□□□□ -1.75
EPHA3P29320 SETP2-201ENST00000553886 926 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.14□□□□□ -1.75
EPHA3P29320 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.14□□□□□ -1.75
EPHA3P29320 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.14□□□□□ -1.75
EPHA3P29320 MIR3934-201ENST00000579806 107 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.14□□□□□ -1.75
EPHA3P29320 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.14□□□□□ -1.75
EPHA3P29320 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.14□□□□□ -1.75
EPHA3P29320 AC068790.3-201ENST00000602988 553 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 AL355812.1-201ENST00000603215 216 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 AL354984.3-201ENST00000604803 325 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 AC024940.4-201ENST00000605507 246 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 AL109618.2-201ENST00000605527 211 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 AC099669.2-201ENST00000616549 437 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 AP001784.1-201ENST00000624107 428 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 AC091905.1-201ENST00000624400 311 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 CR381572.1-201ENST00000625098 102 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 AL159972.1-201ENST00000625150 448 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
EPHA3P29320 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
EPHA3P29320 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
EPHA3P29320 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
EPHA3P29320 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 AC009902.3-201ENST00000606235 2172 ntBASIC4.14□□□□□ -1.75
EPHA3P29320 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
EPHA3P29320 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
EPHA3P29320 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
EPHA3P29320 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
EPHA3P29320 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
EPHA3P29320 EIF2AP4-201ENST00000424793 1781 ntBASIC4.13□□□□□ -1.75
EPHA3P29320 RNU4-1-201ENST00000363925 141 ntBASIC4.13□□□□□ -1.75
EPHA3P29320 Y_RNA.409-201ENST00000383990 98 ntBASIC4.13□□□□□ -1.75
EPHA3P29320 AL590002.1-201ENST00000406554 418 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms