Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.77□□□□□ -1.65
ATF4P18848 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.77□□□□□ -1.65
ATF4P18848 RNU7-66P-201ENST00000459469 62 ntBASIC4.77□□□□□ -1.65
ATF4P18848 AP000926.1-201ENST00000479573 241 ntBASIC4.77□□□□□ -1.65
ATF4P18848 RN7SL170P-201ENST00000487098 295 ntBASIC4.77□□□□□ -1.65
ATF4P18848 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC4.77□□□□□ -1.65
ATF4P18848 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ATF4P18848 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.77□□□□□ -1.65
ATF4P18848 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.77□□□□□ -1.65
ATF4P18848 HIGD1AP5-201ENST00000529959 259 ntBASIC4.77□□□□□ -1.65
ATF4P18848 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC4.77□□□□□ -1.65
ATF4P18848 TOMM20P1-201ENST00000534518 427 ntBASIC4.77□□□□□ -1.65
ATF4P18848 AC135001.1-201ENST00000544546 283 ntBASIC4.77□□□□□ -1.65
ATF4P18848 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC4.77□□□□□ -1.65
ATF4P18848 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
ATF4P18848 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ATF4P18848 NPIPB1P-202ENST00000588786 828 ntBASIC4.77□□□□□ -1.65
ATF4P18848 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC4.77□□□□□ -1.65
ATF4P18848 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC4.77□□□□□ -1.65
ATF4P18848 AC073046.2-201ENST00000604756 527 ntBASIC4.77□□□□□ -1.65
ATF4P18848 ATP1B3P1-201ENST00000605365 821 ntBASIC4.77□□□□□ -1.65
ATF4P18848 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.77□□□□□ -1.65
ATF4P18848 AC007546.1-201ENST00000619452 559 ntBASIC4.77□□□□□ -1.65
ATF4P18848 AL023881.1-201ENST00000621088 301 ntBASIC4.77□□□□□ -1.65
ATF4P18848 C2orf27A-204ENST00000623058 969 ntBASIC4.77□□□□□ -1.65
ATF4P18848 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.77□□□□□ -1.65
ATF4P18848 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.77□□□□□ -1.65
ATF4P18848 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ATF4P18848 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ATF4P18848 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
ATF4P18848 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ATF4P18848 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.77□□□□□ -1.65
ATF4P18848 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
ATF4P18848 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.77□□□□□ -1.65
ATF4P18848 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ATF4P18848 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ATF4P18848 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
ATF4P18848 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ATF4P18848 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ATF4P18848 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ATF4P18848 AC114947.2-201ENST00000565748 2125 ntBASIC4.76□□□□□ -1.65
ATF4P18848 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.76□□□□□ -1.65
ATF4P18848 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.76□□□□□ -1.65
ATF4P18848 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ATF4P18848 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
ATF4P18848 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
ATF4P18848 OR51H2P-202ENST00000641424 3046 ntBASIC4.76□□□□□ -1.65
ATF4P18848 USP8P1-201ENST00000494673 3183 ntBASIC4.76□□□□□ -1.65
ATF4P18848 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
ATF4P18848 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
ATF4P18848 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
ATF4P18848 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.76□□□□□ -1.65
ATF4P18848 RNU6-50P-201ENST00000362356 103 ntBASIC4.76□□□□□ -1.65
ATF4P18848 RNU6-1252P-201ENST00000363054 104 ntBASIC4.76□□□□□ -1.65
ATF4P18848 RN7SKP171-201ENST00000364417 303 ntBASIC4.76□□□□□ -1.65
ATF4P18848 AL031985.1-201ENST00000392713 418 ntBASIC4.76□□□□□ -1.65
ATF4P18848 RPL11P3-201ENST00000395256 523 ntBASIC4.76□□□□□ -1.65
ATF4P18848 RPL12P23-201ENST00000405880 490 ntBASIC4.76□□□□□ -1.65
ATF4P18848 FAT1P1-201ENST00000406588 507 ntBASIC4.76□□□□□ -1.65
ATF4P18848 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ATF4P18848 RPLP0P7-201ENST00000416050 667 ntBASIC4.76□□□□□ -1.65
ATF4P18848 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.76□□□□□ -1.65
ATF4P18848 RPL12P11-201ENST00000439970 501 ntBASIC4.76□□□□□ -1.65
ATF4P18848 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.76□□□□□ -1.65
ATF4P18848 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.76□□□□□ -1.65
ATF4P18848 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC4.76□□□□□ -1.65
ATF4P18848 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.76□□□□□ -1.65
ATF4P18848 AC097359.1-201ENST00000447946 463 ntBASIC4.76□□□□□ -1.65
ATF4P18848 AL162739.1-201ENST00000450606 307 ntBASIC4.76□□□□□ -1.65
ATF4P18848 RPL21P41-201ENST00000459863 264 ntBASIC4.76□□□□□ -1.65
ATF4P18848 RN7SL369P-201ENST00000477138 299 ntBASIC4.76□□□□□ -1.65
ATF4P18848 RPL31P60-201ENST00000478450 367 ntBASIC4.76□□□□□ -1.65
ATF4P18848 AP002812.1-201ENST00000495378 474 ntBASIC4.76□□□□□ -1.65
ATF4P18848 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC4.76□□□□□ -1.65
ATF4P18848 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.76□□□□□ -1.65
ATF4P18848 RPL39P5-202ENST00000512505 151 ntBASIC4.76□□□□□ -1.65
ATF4P18848 RNU6-277P-201ENST00000516272 106 ntBASIC4.76□□□□□ -1.65
ATF4P18848 RNU6-273P-201ENST00000516937 96 ntBASIC4.76□□□□□ -1.65
ATF4P18848 IGHV4-55-201ENST00000520889 368 ntBASIC4.76□□□□□ -1.65
ATF4P18848 CYCSP25-201ENST00000525280 316 ntBASIC4.76□□□□□ -1.65
ATF4P18848 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.76□□□□□ -1.65
ATF4P18848 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.76□□□□□ -1.65
ATF4P18848 AC090115.3-201ENST00000553218 849 ntBASIC4.76□□□□□ -1.65
ATF4P18848 AC027229.1-201ENST00000583887 253 ntBASIC4.76□□□□□ -1.65
ATF4P18848 AC119403.2-201ENST00000590960 598 ntBASIC4.76□□□□□ -1.65
ATF4P18848 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.76□□□□□ -1.65
ATF4P18848 AC044792.1-201ENST00000593294 196 ntBASIC4.76□□□□□ -1.65
ATF4P18848 AC113139.1-201ENST00000605049 239 ntBASIC4.76□□□□□ -1.65
ATF4P18848 IGKV2OR2-1-201ENST00000605129 304 ntBASIC4.76□□□□□ -1.65
ATF4P18848 AL133481.2-203ENST00000607558 139 ntBASIC4.76□□□□□ -1.65
ATF4P18848 AC006023.2-201ENST00000609916 167 ntBASIC4.76□□□□□ -1.65
ATF4P18848 AC010632.3-201ENST00000611377 369 ntBASIC4.76□□□□□ -1.65
ATF4P18848 uc_338.29-201ENST00000615099 168 ntBASIC4.76□□□□□ -1.65
ATF4P18848 AC015871.5-202ENST00000623252 701 ntBASIC4.76□□□□□ -1.65
ATF4P18848 AC008568.2-201ENST00000623862 2313 ntBASIC4.76□□□□□ -1.65
ATF4P18848 AC022418.1-201ENST00000624118 445 ntBASIC4.76□□□□□ -1.65
ATF4P18848 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.76□□□□□ -1.65
ATF4P18848 AL512643.1-201ENST00000635735 524 ntBASIC4.76□□□□□ -1.65
ATF4P18848 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
ATF4P18848 SCN1A-220ENST00000641603 12506 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms