Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AL118496.1-201ENST00000440201 1812 ntBASIC2.13□□□□□ -2.07
HMGA1P17096 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HMGA1P17096 RPL5P19-201ENST00000404228 893 ntBASIC2.13□□□□□ -2.07
HMGA1P17096 XKRYP4-201ENST00000414395 483 ntBASIC2.13□□□□□ -2.07
HMGA1P17096 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.13□□□□□ -2.07
HMGA1P17096 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.13□□□□□ -2.07
HMGA1P17096 SDR42E1P3-201ENST00000438345 502 ntBASIC2.13□□□□□ -2.07
HMGA1P17096 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.13□□□□□ -2.07
HMGA1P17096 VN1R48P-201ENST00000448149 1036 ntBASIC2.13□□□□□ -2.07
HMGA1P17096 XKRYP5-201ENST00000449659 483 ntBASIC2.13□□□□□ -2.07
HMGA1P17096 AC072039.1-201ENST00000477611 581 ntBASIC2.13□□□□□ -2.07
HMGA1P17096 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.13□□□□□ -2.07
HMGA1P17096 AC116337.1-201ENST00000509680 687 ntBASIC2.13□□□□□ -2.07
HMGA1P17096 RPL7L1P13-201ENST00000511702 739 ntBASIC2.13□□□□□ -2.07
HMGA1P17096 RN7SKP282-201ENST00000516824 299 ntBASIC2.13□□□□□ -2.07
HMGA1P17096 SMARCE1P4-201ENST00000523647 241 ntBASIC2.13□□□□□ -2.07
HMGA1P17096 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.13□□□□□ -2.07
HMGA1P17096 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.13□□□□□ -2.07
HMGA1P17096 MTCYBP28-201ENST00000566728 1132 ntBASIC2.13□□□□□ -2.07
HMGA1P17096 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.13□□□□□ -2.07
HMGA1P17096 MIR4769-201ENST00000584126 77 ntBASIC2.13□□□□□ -2.07
HMGA1P17096 AC120053.1-201ENST00000607706 736 ntBASIC2.13□□□□□ -2.07
HMGA1P17096 RPL23AP61-201ENST00000623642 466 ntBASIC2.13□□□□□ -2.07
HMGA1P17096 AC022031.1-201ENST00000585985 2593 ntBASIC2.13□□□□□ -2.07
HMGA1P17096 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HMGA1P17096 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HMGA1P17096 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HMGA1P17096 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
HMGA1P17096 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMGA1P17096 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
HMGA1P17096 RNU6-76P-201ENST00000384060 104 ntBASIC2.12□□□□□ -2.07
HMGA1P17096 HSPE1P26-201ENST00000405341 275 ntBASIC2.12□□□□□ -2.07
HMGA1P17096 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.12□□□□□ -2.07
HMGA1P17096 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.12□□□□□ -2.07
HMGA1P17096 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.12□□□□□ -2.07
HMGA1P17096 RPL34P26-201ENST00000445636 354 ntBASIC2.12□□□□□ -2.07
HMGA1P17096 IFNA11P-201ENST00000446352 526 ntBASIC2.12□□□□□ -2.07
HMGA1P17096 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.12□□□□□ -2.07
HMGA1P17096 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.12□□□□□ -2.07
HMGA1P17096 AC090543.1-201ENST00000492168 485 ntBASIC2.12□□□□□ -2.07
HMGA1P17096 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.12□□□□□ -2.07
HMGA1P17096 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.12□□□□□ -2.07
HMGA1P17096 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.12□□□□□ -2.07
HMGA1P17096 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.12□□□□□ -2.07
HMGA1P17096 AL163153.1-201ENST00000554223 283 ntBASIC2.12□□□□□ -2.07
HMGA1P17096 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC2.12□□□□□ -2.07
HMGA1P17096 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.12□□□□□ -2.07
HMGA1P17096 DEFB122-202ENST00000569013 197 ntBASIC2.12□□□□□ -2.07
HMGA1P17096 AL133393.1-201ENST00000603277 287 ntBASIC2.12□□□□□ -2.07
HMGA1P17096 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.12□□□□□ -2.07
HMGA1P17096 API5P2-201ENST00000397055 1498 ntBASIC2.12□□□□□ -2.07
HMGA1P17096 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.12□□□□□ -2.07
HMGA1P17096 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.12□□□□□ -2.07
HMGA1P17096 AL512283.1-201ENST00000606756 1384 ntBASIC2.11□□□□□ -2.07
HMGA1P17096 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
HMGA1P17096 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.11□□□□□ -2.07
HMGA1P17096 AP000567.1-201ENST00000406413 156 ntBASIC2.11□□□□□ -2.07
HMGA1P17096 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.11□□□□□ -2.07
HMGA1P17096 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.11□□□□□ -2.07
HMGA1P17096 AC027124.2-201ENST00000428249 105 ntBASIC2.11□□□□□ -2.07
HMGA1P17096 HIGD1AP11-201ENST00000438361 280 ntBASIC2.11□□□□□ -2.07
HMGA1P17096 RSL24D1P2-201ENST00000445584 366 ntBASIC2.11□□□□□ -2.07
HMGA1P17096 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGA1P17096 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.11□□□□□ -2.07
HMGA1P17096 HMGB3P30-201ENST00000457863 606 ntBASIC2.11□□□□□ -2.07
HMGA1P17096 AP000852.1-201ENST00000472460 573 ntBASIC2.11□□□□□ -2.07
HMGA1P17096 GZMAP1-201ENST00000503054 631 ntBASIC2.11□□□□□ -2.07
HMGA1P17096 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGA1P17096 AP004242.1-201ENST00000533701 349 ntBASIC2.11□□□□□ -2.07
HMGA1P17096 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.11□□□□□ -2.07
HMGA1P17096 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.11□□□□□ -2.07
HMGA1P17096 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.11□□□□□ -2.07
HMGA1P17096 AC018630.1-201ENST00000541376 925 ntBASIC2.11□□□□□ -2.07
HMGA1P17096 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.11□□□□□ -2.07
HMGA1P17096 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.11□□□□□ -2.07
HMGA1P17096 AC006270.2-201ENST00000578523 652 ntBASIC2.11□□□□□ -2.07
HMGA1P17096 AL135786.2-201ENST00000608422 615 ntBASIC2.11□□□□□ -2.07
HMGA1P17096 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.11□□□□□ -2.07
HMGA1P17096 AL121594.5-201ENST00000631724 573 ntBASIC2.11□□□□□ -2.07
HMGA1P17096 AC099063.3-201ENST00000642066 185 ntBASIC2.11□□□□□ -2.07
HMGA1P17096 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HMGA1P17096 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HMGA1P17096 RN7SKP226-201ENST00000364912 300 ntBASIC2.1□□□□□ -2.07
HMGA1P17096 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.1□□□□□ -2.07
HMGA1P17096 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGA1P17096 ELOCP10-201ENST00000440624 327 ntBASIC2.1□□□□□ -2.07
HMGA1P17096 USP9YP8-201ENST00000441913 500 ntBASIC2.1□□□□□ -2.07
HMGA1P17096 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.1□□□□□ -2.07
HMGA1P17096 RPS15AP1-201ENST00000457423 391 ntBASIC2.1□□□□□ -2.07
HMGA1P17096 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.1□□□□□ -2.07
HMGA1P17096 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HMGA1P17096 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.1□□□□□ -2.07
HMGA1P17096 AC021733.2-201ENST00000518830 497 ntBASIC2.1□□□□□ -2.07
HMGA1P17096 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGA1P17096 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.1□□□□□ -2.07
HMGA1P17096 AMZ2P1-203ENST00000565833 850 ntBASIC2.1□□□□□ -2.07
HMGA1P17096 MIR5089-201ENST00000580047 84 ntBASIC2.1□□□□□ -2.07
HMGA1P17096 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
HMGA1P17096 AC090953.1-201ENST00000604305 1092 ntBASIC2.1□□□□□ -2.07
HMGA1P17096 ELOCP34-201ENST00000604436 327 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms