Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MIR7112-201ENST00000616126 65 ntBASIC3.06□□□□□ -1.92
TPM1P09493 CYCSP41-201ENST00000616920 296 ntBASIC3.06□□□□□ -1.92
TPM1P09493 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.06□□□□□ -1.92
TPM1P09493 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.06□□□□□ -1.92
TPM1P09493 AC002064.3-201ENST00000623448 346 ntBASIC3.06□□□□□ -1.92
TPM1P09493 AC010297.1-201ENST00000623948 149 ntBASIC3.06□□□□□ -1.92
TPM1P09493 AC026422.1-201ENST00000623961 452 ntBASIC3.06□□□□□ -1.92
TPM1P09493 AC034229.5-201ENST00000624258 185 ntBASIC3.06□□□□□ -1.92
TPM1P09493 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.06□□□□□ -1.92
TPM1P09493 AL121594.5-201ENST00000631724 573 ntBASIC3.06□□□□□ -1.92
TPM1P09493 U6.105-201ENST00000637379 88 ntBASIC3.06□□□□□ -1.92
TPM1P09493 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TPM1P09493 AC099654.7-201ENST00000635788 2127 ntBASIC3.05□□□□□ -1.92
TPM1P09493 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TPM1P09493 AC111188.2-201ENST00000529697 1387 ntBASIC3.05□□□□□ -1.92
TPM1P09493 AC025263.3-201ENST00000622965 1396 ntBASIC3.05□□□□□ -1.92
TPM1P09493 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.05□□□□□ -1.92
TPM1P09493 RNU5D-1-201ENST00000363299 116 ntBASIC3.05□□□□□ -1.92
TPM1P09493 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
TPM1P09493 DEFA7P-201ENST00000382676 285 ntBASIC3.05□□□□□ -1.92
TPM1P09493 MIR183-201ENST00000384958 110 ntBASIC3.05□□□□□ -1.92
TPM1P09493 CYCSP45-201ENST00000402289 315 ntBASIC3.05□□□□□ -1.92
TPM1P09493 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.05□□□□□ -1.92
TPM1P09493 AL035410.1-201ENST00000427409 427 ntBASIC3.05□□□□□ -1.92
TPM1P09493 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.05□□□□□ -1.92
TPM1P09493 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TPM1P09493 MRPL50P4-201ENST00000446432 475 ntBASIC3.05□□□□□ -1.92
TPM1P09493 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.05□□□□□ -1.92
TPM1P09493 RPS3AP43-201ENST00000479743 781 ntBASIC3.05□□□□□ -1.92
TPM1P09493 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TPM1P09493 AIG1P1-201ENST00000503376 148 ntBASIC3.05□□□□□ -1.92
TPM1P09493 AC083906.5-201ENST00000503722 328 ntBASIC3.05□□□□□ -1.92
TPM1P09493 AC117522.3-201ENST00000507974 584 ntBASIC3.05□□□□□ -1.92
TPM1P09493 SCARNA13-201ENST00000516672 275 ntBASIC3.05□□□□□ -1.92
TPM1P09493 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TPM1P09493 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.05□□□□□ -1.92
TPM1P09493 ATP5F1P7-201ENST00000567330 760 ntBASIC3.05□□□□□ -1.92
TPM1P09493 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.05□□□□□ -1.92
TPM1P09493 ADAM3B-201ENST00000569937 840 ntBASIC3.05□□□□□ -1.92
TPM1P09493 AC019159.1-201ENST00000605094 187 ntBASIC3.05□□□□□ -1.92
TPM1P09493 AC008277.2-201ENST00000605196 797 ntBASIC3.05□□□□□ -1.92
TPM1P09493 MIR7975-201ENST00000619350 68 ntBASIC3.05□□□□□ -1.92
TPM1P09493 CR381653.2-201ENST00000624041 768 ntBASIC3.05□□□□□ -1.92
TPM1P09493 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.05□□□□□ -1.92
TPM1P09493 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TPM1P09493 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.05□□□□□ -1.92
TPM1P09493 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.04□□□□□ -1.92
TPM1P09493 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.04□□□□□ -1.92
TPM1P09493 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TPM1P09493 SNORD56.5-201ENST00000364281 72 ntBASIC3.04□□□□□ -1.92
TPM1P09493 MIR449B-201ENST00000384995 97 ntBASIC3.04□□□□□ -1.92
TPM1P09493 FO393413.1-201ENST00000402892 195 ntBASIC3.04□□□□□ -1.92
TPM1P09493 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.04□□□□□ -1.92
TPM1P09493 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.04□□□□□ -1.92
TPM1P09493 MTND4P24-201ENST00000424002 397 ntBASIC3.04□□□□□ -1.92
TPM1P09493 AC127537.2-201ENST00000439258 465 ntBASIC3.04□□□□□ -1.92
TPM1P09493 RPS26P30-201ENST00000443431 335 ntBASIC3.04□□□□□ -1.92
TPM1P09493 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.04□□□□□ -1.92
TPM1P09493 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.04□□□□□ -1.92
TPM1P09493 AL359385.1-201ENST00000456509 365 ntBASIC3.04□□□□□ -1.92
TPM1P09493 AC093663.2-201ENST00000484625 313 ntBASIC3.04□□□□□ -1.92
TPM1P09493 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.04□□□□□ -1.92
TPM1P09493 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.04□□□□□ -1.92
TPM1P09493 AC090695.1-201ENST00000561269 1222 ntBASIC3.04□□□□□ -1.92
TPM1P09493 AL020997.2-201ENST00000602607 184 ntBASIC3.04□□□□□ -1.92
TPM1P09493 BX664608.1-201ENST00000610519 487 ntBASIC3.04□□□□□ -1.92
TPM1P09493 SNHG22-203ENST00000617833 660 ntBASIC3.04□□□□□ -1.92
TPM1P09493 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.04□□□□□ -1.92
TPM1P09493 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.04□□□□□ -1.92
TPM1P09493 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.04□□□□□ -1.92
TPM1P09493 AC130650.2-201ENST00000618736 2403 ntBASIC3.04□□□□□ -1.92
TPM1P09493 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.03□□□□□ -1.92
TPM1P09493 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TPM1P09493 MIR6073-201ENST00000352083 89 ntBASIC3.03□□□□□ -1.92
TPM1P09493 SNORD51.1-201ENST00000365405 77 ntBASIC3.03□□□□□ -1.92
TPM1P09493 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.03□□□□□ -1.92
TPM1P09493 MIR493-201ENST00000385254 89 ntBASIC3.03□□□□□ -1.92
TPM1P09493 RNA5SP120-201ENST00000410900 112 ntBASIC3.03□□□□□ -1.92
TPM1P09493 AC244453.4-201ENST00000419150 388 ntBASIC3.03□□□□□ -1.92
TPM1P09493 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.03□□□□□ -1.92
TPM1P09493 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.03□□□□□ -1.92
TPM1P09493 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.03□□□□□ -1.92
TPM1P09493 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.03□□□□□ -1.92
TPM1P09493 AC006445.1-201ENST00000491925 405 ntBASIC3.03□□□□□ -1.92
TPM1P09493 CBX3P3-201ENST00000508108 532 ntBASIC3.03□□□□□ -1.92
TPM1P09493 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.03□□□□□ -1.92
TPM1P09493 AC090136.1-201ENST00000520009 240 ntBASIC3.03□□□□□ -1.92
TPM1P09493 HMGB1P41-201ENST00000520234 440 ntBASIC3.03□□□□□ -1.92
TPM1P09493 AP002404.1-201ENST00000532005 451 ntBASIC3.03□□□□□ -1.92
TPM1P09493 AC025918.2-201ENST00000558683 763 ntBASIC3.03□□□□□ -1.92
TPM1P09493 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
TPM1P09493 HSPE1P7-201ENST00000604681 321 ntBASIC3.03□□□□□ -1.92
TPM1P09493 AL162274.2-201ENST00000614406 332 ntBASIC3.03□□□□□ -1.92
TPM1P09493 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.03□□□□□ -1.92
TPM1P09493 AC040168.1-201ENST00000623594 991 ntBASIC3.03□□□□□ -1.92
TPM1P09493 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.03□□□□□ -1.92
TPM1P09493 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.02□□□□□ -1.93
TPM1P09493 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.02□□□□□ -1.93
TPM1P09493 AL513185.3-201ENST00000433335 1300 ntBASIC3.02□□□□□ -1.93
TPM1P09493 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms