Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 AL953862.1-201ENST00000423016 168 ntBASIC3.53□□□□□ -1.84
VIMP08670 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.53□□□□□ -1.84
VIMP08670 USP9YP35-201ENST00000435696 412 ntBASIC3.53□□□□□ -1.84
VIMP08670 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.53□□□□□ -1.84
VIMP08670 SDCBPP1-201ENST00000440192 890 ntBASIC3.53□□□□□ -1.84
VIMP08670 BX322784.1-201ENST00000455793 1077 ntBASIC3.53□□□□□ -1.84
VIMP08670 AC021205.2-201ENST00000480069 347 ntBASIC3.53□□□□□ -1.84
VIMP08670 RN7SL283P-201ENST00000489055 303 ntBASIC3.53□□□□□ -1.84
VIMP08670 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.53□□□□□ -1.84
VIMP08670 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.53□□□□□ -1.84
VIMP08670 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.53□□□□□ -1.84
VIMP08670 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.53□□□□□ -1.84
VIMP08670 AC093677.1-201ENST00000514414 678 ntBASIC3.53□□□□□ -1.84
VIMP08670 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.53□□□□□ -1.84
VIMP08670 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VIMP08670 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.53□□□□□ -1.84
VIMP08670 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.53□□□□□ -1.84
VIMP08670 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.53□□□□□ -1.84
VIMP08670 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.53□□□□□ -1.84
VIMP08670 AL031176.1-201ENST00000604554 466 ntBASIC3.53□□□□□ -1.84
VIMP08670 AC004853.1-201ENST00000604902 698 ntBASIC3.53□□□□□ -1.84
VIMP08670 AC006927.4-201ENST00000639187 543 ntBASIC3.53□□□□□ -1.84
VIMP08670 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
VIMP08670 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VIMP08670 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
VIMP08670 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.53□□□□□ -1.84
VIMP08670 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VIMP08670 ZNF876P-202ENST00000398732 1485 ntBASIC3.53□□□□□ -1.84
VIMP08670 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.53□□□□□ -1.85
VIMP08670 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.52□□□□□ -1.85
VIMP08670 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
VIMP08670 RNU6-343P-201ENST00000364709 104 ntBASIC3.52□□□□□ -1.85
VIMP08670 DYNLT3P1-201ENST00000378574 347 ntBASIC3.52□□□□□ -1.85
VIMP08670 AL354719.1-201ENST00000406535 843 ntBASIC3.52□□□□□ -1.85
VIMP08670 RNU6-757P-201ENST00000410334 100 ntBASIC3.52□□□□□ -1.85
VIMP08670 MTCYBP38-201ENST00000417160 1123 ntBASIC3.52□□□□□ -1.85
VIMP08670 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.52□□□□□ -1.85
VIMP08670 RPL23AP82-202ENST00000427528 469 ntBASIC3.52□□□□□ -1.85
VIMP08670 DPPA2P1-201ENST00000428060 556 ntBASIC3.52□□□□□ -1.85
VIMP08670 OR2B8P-201ENST00000432841 938 ntBASIC3.52□□□□□ -1.85
VIMP08670 RABEPKP1-201ENST00000440529 1026 ntBASIC3.52□□□□□ -1.85
VIMP08670 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VIMP08670 AC114755.5-201ENST00000447760 831 ntBASIC3.52□□□□□ -1.85
VIMP08670 SSXP4-201ENST00000451349 245 ntBASIC3.52□□□□□ -1.85
VIMP08670 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.52□□□□□ -1.85
VIMP08670 CENPBD1P1-201ENST00000464061 469 ntBASIC3.52□□□□□ -1.85
VIMP08670 RPL31P50-201ENST00000471002 296 ntBASIC3.52□□□□□ -1.85
VIMP08670 RPL7P5-201ENST00000471472 736 ntBASIC3.52□□□□□ -1.85
VIMP08670 RN7SL132P-201ENST00000478131 296 ntBASIC3.52□□□□□ -1.85
VIMP08670 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
VIMP08670 RNA5SP468-201ENST00000516782 93 ntBASIC3.52□□□□□ -1.85
VIMP08670 AC107934.2-201ENST00000518653 310 ntBASIC3.52□□□□□ -1.85
VIMP08670 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
VIMP08670 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
VIMP08670 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.52□□□□□ -1.85
VIMP08670 MIR5186-201ENST00000577504 120 ntBASIC3.52□□□□□ -1.85
VIMP08670 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.52□□□□□ -1.85
VIMP08670 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.52□□□□□ -1.85
VIMP08670 DUXAP11-201ENST00000603858 526 ntBASIC3.52□□□□□ -1.85
VIMP08670 AL596245.1-201ENST00000618994 362 ntBASIC3.52□□□□□ -1.85
VIMP08670 CRYM-AS1-204ENST00000637983 556 ntBASIC3.52□□□□□ -1.85
VIMP08670 MIR492-201ENST00000638676 116 ntBASIC3.52□□□□□ -1.85
VIMP08670 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.52□□□□□ -1.85
VIMP08670 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VIMP08670 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.52□□□□□ -1.85
VIMP08670 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
VIMP08670 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VIMP08670 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.51□□□□□ -1.85
VIMP08670 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
VIMP08670 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.51□□□□□ -1.85
VIMP08670 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VIMP08670 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VIMP08670 U3.22-201ENST00000391120 215 ntBASIC3.51□□□□□ -1.85
VIMP08670 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.51□□□□□ -1.85
VIMP08670 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VIMP08670 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.51□□□□□ -1.85
VIMP08670 SDCBPP3-201ENST00000419629 891 ntBASIC3.51□□□□□ -1.85
VIMP08670 AC006960.1-201ENST00000419980 153 ntBASIC3.51□□□□□ -1.85
VIMP08670 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.51□□□□□ -1.85
VIMP08670 MTCO1P39-201ENST00000426148 480 ntBASIC3.51□□□□□ -1.85
VIMP08670 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.51□□□□□ -1.85
VIMP08670 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.51□□□□□ -1.85
VIMP08670 ZYG11AP1-201ENST00000430329 837 ntBASIC3.51□□□□□ -1.85
VIMP08670 RPL23AP69-201ENST00000431134 458 ntBASIC3.51□□□□□ -1.85
VIMP08670 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.51□□□□□ -1.85
VIMP08670 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.51□□□□□ -1.85
VIMP08670 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.51□□□□□ -1.85
VIMP08670 RPL23AP31-201ENST00000456160 467 ntBASIC3.51□□□□□ -1.85
VIMP08670 RPS29P33-201ENST00000456717 146 ntBASIC3.51□□□□□ -1.85
VIMP08670 SNORD11.1-201ENST00000459482 85 ntBASIC3.51□□□□□ -1.85
VIMP08670 MEMO1P3-201ENST00000459811 302 ntBASIC3.51□□□□□ -1.85
VIMP08670 AC091179.1-201ENST00000461606 579 ntBASIC3.51□□□□□ -1.85
VIMP08670 RPS7P7-201ENST00000463499 571 ntBASIC3.51□□□□□ -1.85
VIMP08670 AC010618.1-201ENST00000469924 477 ntBASIC3.51□□□□□ -1.85
VIMP08670 FAM172BP-201ENST00000487497 1089 ntBASIC3.51□□□□□ -1.85
VIMP08670 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.51□□□□□ -1.85
VIMP08670 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.51□□□□□ -1.85
VIMP08670 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.51□□□□□ -1.85
VIMP08670 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.51□□□□□ -1.85
VIMP08670 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms