Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.47□□□□□ -2.01
COL4A1P02462 MIR6132-201ENST00000622083 109 ntBASIC2.47□□□□□ -2.01
COL4A1P02462 AC073348.1-201ENST00000623002 331 ntBASIC2.47□□□□□ -2.01
COL4A1P02462 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.47□□□□□ -2.01
COL4A1P02462 AC107021.2-201ENST00000567714 2095 ntBASIC2.47□□□□□ -2.01
COL4A1P02462 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
COL4A1P02462 AC006378.2-201ENST00000623178 2476 ntBASIC2.47□□□□□ -2.01
COL4A1P02462 Y_RNA.40-201ENST00000362645 93 ntBASIC2.47□□□□□ -2.01
COL4A1P02462 EI24P1-201ENST00000416584 867 ntBASIC2.47□□□□□ -2.01
COL4A1P02462 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC2.47□□□□□ -2.01
COL4A1P02462 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.47□□□□□ -2.01
COL4A1P02462 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.47□□□□□ -2.01
COL4A1P02462 AC025181.1-201ENST00000477507 416 ntBASIC2.47□□□□□ -2.01
COL4A1P02462 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.47□□□□□ -2.01
COL4A1P02462 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC2.47□□□□□ -2.01
COL4A1P02462 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC2.47□□□□□ -2.01
COL4A1P02462 AC096586.2-201ENST00000610260 441 ntBASIC2.47□□□□□ -2.01
COL4A1P02462 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.47□□□□□ -2.01
COL4A1P02462 AC010680.1-201ENST00000590024 3590 ntBASIC2.46□□□□□ -2.02
COL4A1P02462 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
COL4A1P02462 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.46□□□□□ -2.02
COL4A1P02462 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
COL4A1P02462 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.46□□□□□ -2.02
COL4A1P02462 AC008173.1-201ENST00000418901 264 ntBASIC2.46□□□□□ -2.02
COL4A1P02462 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.46□□□□□ -2.02
COL4A1P02462 RPL7P53-201ENST00000421245 739 ntBASIC2.46□□□□□ -2.02
COL4A1P02462 AL121578.1-201ENST00000428051 892 ntBASIC2.46□□□□□ -2.02
COL4A1P02462 AC113398.2-201ENST00000507630 558 ntBASIC2.46□□□□□ -2.02
COL4A1P02462 RN7SKP282-201ENST00000516824 299 ntBASIC2.46□□□□□ -2.02
COL4A1P02462 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.46□□□□□ -2.02
COL4A1P02462 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.46□□□□□ -2.02
COL4A1P02462 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.46□□□□□ -2.02
COL4A1P02462 AC004486.1-201ENST00000546846 233 ntBASIC2.46□□□□□ -2.02
COL4A1P02462 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.46□□□□□ -2.02
COL4A1P02462 AC120053.1-201ENST00000607706 736 ntBASIC2.46□□□□□ -2.02
COL4A1P02462 AP005212.4-201ENST00000614206 710 ntBASIC2.46□□□□□ -2.02
COL4A1P02462 AC244517.12-201ENST00000623581 663 ntBASIC2.46□□□□□ -2.02
COL4A1P02462 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
COL4A1P02462 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
COL4A1P02462 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC2.45□□□□□ -2.02
COL4A1P02462 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
COL4A1P02462 AC007390.1-201ENST00000415722 356 ntBASIC2.45□□□□□ -2.02
COL4A1P02462 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC2.45□□□□□ -2.02
COL4A1P02462 SDR42E1P3-201ENST00000438345 502 ntBASIC2.45□□□□□ -2.02
COL4A1P02462 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.45□□□□□ -2.02
COL4A1P02462 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.45□□□□□ -2.02
COL4A1P02462 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.45□□□□□ -2.02
COL4A1P02462 AC098583.1-201ENST00000480875 255 ntBASIC2.45□□□□□ -2.02
COL4A1P02462 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.45□□□□□ -2.02
COL4A1P02462 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC2.45□□□□□ -2.02
COL4A1P02462 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.45□□□□□ -2.02
COL4A1P02462 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC2.45□□□□□ -2.02
COL4A1P02462 MIR3670-2-201ENST00000582974 65 ntBASIC2.45□□□□□ -2.02
COL4A1P02462 MIR3670-1-201ENST00000584160 65 ntBASIC2.45□□□□□ -2.02
COL4A1P02462 MIR3670-3-201ENST00000584855 65 ntBASIC2.45□□□□□ -2.02
COL4A1P02462 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.45□□□□□ -2.02
COL4A1P02462 AP000787.2-201ENST00000604432 568 ntBASIC2.45□□□□□ -2.02
COL4A1P02462 MIR3670-4-201ENST00000612260 65 ntBASIC2.45□□□□□ -2.02
COL4A1P02462 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.45□□□□□ -2.02
COL4A1P02462 AC091953.2-201ENST00000623979 160 ntBASIC2.45□□□□□ -2.02
COL4A1P02462 ZNF720P1-201ENST00000562403 1939 ntBASIC2.45□□□□□ -2.02
COL4A1P02462 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
COL4A1P02462 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
COL4A1P02462 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
COL4A1P02462 Y_RNA.140-201ENST00000363474 103 ntBASIC2.44□□□□□ -2.02
COL4A1P02462 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.44□□□□□ -2.02
COL4A1P02462 MTND4LP21-201ENST00000415303 295 ntBASIC2.44□□□□□ -2.02
COL4A1P02462 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.44□□□□□ -2.02
COL4A1P02462 Z82205.1-201ENST00000428456 297 ntBASIC2.44□□□□□ -2.02
COL4A1P02462 USP9YP7-201ENST00000436723 430 ntBASIC2.44□□□□□ -2.02
COL4A1P02462 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.44□□□□□ -2.02
COL4A1P02462 CBWD4P-201ENST00000445695 655 ntBASIC2.44□□□□□ -2.02
COL4A1P02462 RPL23AP7-203ENST00000449021 469 ntBASIC2.44□□□□□ -2.02
COL4A1P02462 FABP5P13-201ENST00000452144 328 ntBASIC2.44□□□□□ -2.02
COL4A1P02462 USP9YP32-201ENST00000452432 430 ntBASIC2.44□□□□□ -2.02
COL4A1P02462 AC087385.1-201ENST00000475062 312 ntBASIC2.44□□□□□ -2.02
COL4A1P02462 GTF2IP9-201ENST00000502460 301 ntBASIC2.44□□□□□ -2.02
COL4A1P02462 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.44□□□□□ -2.02
COL4A1P02462 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC2.44□□□□□ -2.02
COL4A1P02462 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.44□□□□□ -2.02
COL4A1P02462 MIR5089-201ENST00000580047 84 ntBASIC2.44□□□□□ -2.02
COL4A1P02462 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.44□□□□□ -2.02
COL4A1P02462 DCAF13P3-201ENST00000561147 1334 ntBASIC2.44□□□□□ -2.02
COL4A1P02462 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
COL4A1P02462 Y_RNA.595-201ENST00000410403 105 ntBASIC2.44□□□□□ -2.02
COL4A1P02462 AL138785.1-201ENST00000425821 331 ntBASIC2.44□□□□□ -2.02
COL4A1P02462 ATP5F1P1-201ENST00000433775 569 ntBASIC2.44□□□□□ -2.02
COL4A1P02462 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC2.44□□□□□ -2.02
COL4A1P02462 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC2.44□□□□□ -2.02
COL4A1P02462 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.44□□□□□ -2.02
COL4A1P02462 BLNK-209ENST00000495266 440 ntTSL 5 BASIC2.44□□□□□ -2.02
COL4A1P02462 HMGB3P15-201ENST00000507326 574 ntBASIC2.44□□□□□ -2.02
COL4A1P02462 AC117522.2-201ENST00000510049 657 ntBASIC2.44□□□□□ -2.02
COL4A1P02462 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC2.44□□□□□ -2.02
COL4A1P02462 SNORD116-30-201ENST00000516468 85 ntBASIC2.44□□□□□ -2.02
COL4A1P02462 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.44□□□□□ -2.02
COL4A1P02462 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.44□□□□□ -2.02
COL4A1P02462 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.44□□□□□ -2.02
COL4A1P02462 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.44□□□□□ -2.02
COL4A1P02462 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms