Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SIX3O95343 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SIX3O95343 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SIX3O95343 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
SIX3O95343 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SIX3O95343 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SIX3O95343 RNU6-328P-201ENST00000390887 106 ntBASIC3.55□□□□□ -1.84
SIX3O95343 MTHFD2P2-201ENST00000407725 247 ntBASIC3.55□□□□□ -1.84
SIX3O95343 MIR1183-201ENST00000408856 89 ntBASIC3.55□□□□□ -1.84
SIX3O95343 AL592310.1-201ENST00000414330 671 ntBASIC3.55□□□□□ -1.84
SIX3O95343 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.55□□□□□ -1.84
SIX3O95343 BEND7P1-201ENST00000422058 457 ntBASIC3.55□□□□□ -1.84
SIX3O95343 MTND2P9-201ENST00000422293 931 ntBASIC3.55□□□□□ -1.84
SIX3O95343 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.55□□□□□ -1.84
SIX3O95343 AC004866.2-201ENST00000438285 481 ntBASIC3.55□□□□□ -1.84
SIX3O95343 SNRPEP7-201ENST00000438350 220 ntBASIC3.55□□□□□ -1.84
SIX3O95343 FGF7P5-201ENST00000441829 291 ntBASIC3.55□□□□□ -1.84
SIX3O95343 RAC1P7-201ENST00000445367 377 ntBASIC3.55□□□□□ -1.84
SIX3O95343 PAXBP1P1-201ENST00000449315 447 ntBASIC3.55□□□□□ -1.84
SIX3O95343 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.55□□□□□ -1.84
SIX3O95343 AC084357.1-201ENST00000473404 255 ntBASIC3.55□□□□□ -1.84
SIX3O95343 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.55□□□□□ -1.84
SIX3O95343 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.55□□□□□ -1.84
SIX3O95343 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.55□□□□□ -1.84
SIX3O95343 AC091951.3-201ENST00000504093 246 ntBASIC3.55□□□□□ -1.84
SIX3O95343 NPM1P41-201ENST00000512920 831 ntBASIC3.55□□□□□ -1.84
SIX3O95343 AC007991.1-201ENST00000522680 631 ntBASIC3.55□□□□□ -1.84
SIX3O95343 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.55□□□□□ -1.84
SIX3O95343 DEFB131D-201ENST00000526803 184 ntBASIC3.55□□□□□ -1.84
SIX3O95343 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
SIX3O95343 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.55□□□□□ -1.84
SIX3O95343 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
SIX3O95343 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.55□□□□□ -1.84
SIX3O95343 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.55□□□□□ -1.84
SIX3O95343 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.55□□□□□ -1.84
SIX3O95343 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.55□□□□□ -1.84
SIX3O95343 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.55□□□□□ -1.84
SIX3O95343 AC244505.7-201ENST00000599675 272 ntBASIC3.55□□□□□ -1.84
SIX3O95343 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.55□□□□□ -1.84
SIX3O95343 AC091057.2-201ENST00000602594 792 ntBASIC3.55□□□□□ -1.84
SIX3O95343 AC005000.2-201ENST00000605468 310 ntBASIC3.55□□□□□ -1.84
SIX3O95343 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SIX3O95343 AP002782.1-201ENST00000623107 614 ntBASIC3.55□□□□□ -1.84
SIX3O95343 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SIX3O95343 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SIX3O95343 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.55□□□□□ -1.84
SIX3O95343 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SIX3O95343 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SIX3O95343 AP004289.2-201ENST00000444413 1457 ntBASIC3.54□□□□□ -1.84
SIX3O95343 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
SIX3O95343 MTND4P34-201ENST00000572715 1371 ntBASIC3.54□□□□□ -1.84
SIX3O95343 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SIX3O95343 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SIX3O95343 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SIX3O95343 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SIX3O95343 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
SIX3O95343 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SIX3O95343 RNU6-1155P-201ENST00000363554 107 ntBASIC3.54□□□□□ -1.84
SIX3O95343 SNORA57.3-201ENST00000411095 141 ntBASIC3.54□□□□□ -1.84
SIX3O95343 RPL30P2-201ENST00000414021 291 ntBASIC3.54□□□□□ -1.84
SIX3O95343 TPMTP2-201ENST00000414372 726 ntBASIC3.54□□□□□ -1.84
SIX3O95343 CCDC58P2-201ENST00000417131 366 ntBASIC3.54□□□□□ -1.84
SIX3O95343 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.54□□□□□ -1.84
SIX3O95343 RPL7P30-201ENST00000420888 709 ntBASIC3.54□□□□□ -1.84
SIX3O95343 AC006989.1-201ENST00000427212 131 ntBASIC3.54□□□□□ -1.84
SIX3O95343 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.54□□□□□ -1.84
SIX3O95343 MTCYBP45-201ENST00000435243 565 ntBASIC3.54□□□□□ -1.84
SIX3O95343 MTCYBP31-201ENST00000438855 1122 ntBASIC3.54□□□□□ -1.84
SIX3O95343 RPS29P7-201ENST00000439662 171 ntBASIC3.54□□□□□ -1.84
SIX3O95343 CR769776.1-201ENST00000441254 787 ntBASIC3.54□□□□□ -1.84
SIX3O95343 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.54□□□□□ -1.84
SIX3O95343 AL133162.1-201ENST00000463228 453 ntBASIC3.54□□□□□ -1.84
SIX3O95343 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.54□□□□□ -1.84
SIX3O95343 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SIX3O95343 AC105914.1-201ENST00000511798 226 ntBASIC3.54□□□□□ -1.84
SIX3O95343 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.54□□□□□ -1.84
SIX3O95343 AC006499.2-201ENST00000513470 337 ntBASIC3.54□□□□□ -1.84
SIX3O95343 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.54□□□□□ -1.84
SIX3O95343 AC090136.1-201ENST00000520009 240 ntBASIC3.54□□□□□ -1.84
SIX3O95343 AC103783.1-201ENST00000520506 373 ntBASIC3.54□□□□□ -1.84
SIX3O95343 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.54□□□□□ -1.84
SIX3O95343 OR6C7P-201ENST00000547875 934 ntBASIC3.54□□□□□ -1.84
SIX3O95343 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.54□□□□□ -1.84
SIX3O95343 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.54□□□□□ -1.84
SIX3O95343 AL391156.1-201ENST00000554965 554 ntBASIC3.54□□□□□ -1.84
SIX3O95343 CYCSP2-201ENST00000558168 301 ntBASIC3.54□□□□□ -1.84
SIX3O95343 OR4K8P-201ENST00000578842 1048 ntBASIC3.54□□□□□ -1.84
SIX3O95343 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.54□□□□□ -1.84
SIX3O95343 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.54□□□□□ -1.84
SIX3O95343 VN1R82P-201ENST00000601481 356 ntBASIC3.54□□□□□ -1.84
SIX3O95343 AC011451.2-201ENST00000604303 598 ntBASIC3.54□□□□□ -1.84
SIX3O95343 AL034351.1-201ENST00000605288 668 ntBASIC3.54□□□□□ -1.84
SIX3O95343 VIS1.1-201ENST00000610517 203 ntBASIC3.54□□□□□ -1.84
SIX3O95343 AL050303.3-201ENST00000613704 284 ntBASIC3.54□□□□□ -1.84
SIX3O95343 AL590099.1-201ENST00000615276 138 ntBASIC3.54□□□□□ -1.84
SIX3O95343 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SIX3O95343 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SIX3O95343 AC006386.1-201ENST00000619436 415 ntBASIC3.54□□□□□ -1.84
SIX3O95343 U7.8-201ENST00000619968 63 ntBASIC3.54□□□□□ -1.84
SIX3O95343 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms