Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
VPS4BO75351 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS4BO75351 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS4BO75351 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.37□□□□□ -1.71
VPS4BO75351 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.37□□□□□ -1.71
VPS4BO75351 LINC00622-201ENST00000562811 1570 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 AL049555.1-201ENST00000562834 1933 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS4BO75351 AC092125.1-201ENST00000562568 1995 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 MFSD8-242ENST00000641690 4199 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 AC067945.1-201ENST00000342609 618 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 RNU1-15P-201ENST00000353977 144 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 RNY4P14-201ENST00000363656 96 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 RNA5SP515-201ENST00000364570 118 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS4BO75351 SNORD115-47-201ENST00000391226 86 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 RPL23AP32-201ENST00000395315 459 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 MIR1277-201ENST00000408536 78 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 RNU2-8P-201ENST00000410727 190 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 RN7SKP167-201ENST00000411047 285 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 SNORA74C-2-201ENST00000411179 201 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 RNU6-195P-201ENST00000411352 109 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS4BO75351 MTCYBP24-201ENST00000420387 1106 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 AC069157.1-201ENST00000421749 137 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS4BO75351 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VPS4BO75351 ISCA1P6-201ENST00000427740 390 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 MTND4LP10-201ENST00000435146 291 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 AL356276.2-201ENST00000435919 558 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS4BO75351 AL451074.3-201ENST00000437709 472 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 CBX1P1-201ENST00000440184 427 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS4BO75351 WASF1P1-201ENST00000447560 1131 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 AC132479.1-201ENST00000449160 144 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 C1DP4-201ENST00000455429 424 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 RPS20P32-201ENST00000456044 356 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS4BO75351 RPL7P15-201ENST00000461190 712 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS4BO75351 FAM92A1P2-202ENST00000504766 877 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS4BO75351 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS4BO75351 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS4BO75351 MYL12AP1-201ENST00000518490 515 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS4BO75351 FAM92A1P1-201ENST00000528023 890 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS4BO75351 AP003497.1-201ENST00000528472 562 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 AC118273.2-201ENST00000532092 465 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS4BO75351 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.37□□□□□ -1.71
VPS4BO75351 AC123904.2-201ENST00000548059 300 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS4BO75351 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.37□□□□□ -1.71
VPS4BO75351 AC105129.1-201ENST00000560250 297 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 AC107954.1-201ENST00000565906 727 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 MIR3118-1-201ENST00000581787 76 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 UBE2L4-201ENST00000587688 464 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS4BO75351 AL365503.1-201ENST00000605247 905 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 AC011816.2-201ENST00000607089 556 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 AL355472.4-201ENST00000610233 626 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 AC012150.2-201ENST00000621300 544 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 AL158801.5-201ENST00000623123 465 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS4BO75351 AC010149.2-201ENST00000637608 315 ntBASIC4.37□□□□□ -1.71
VPS4BO75351 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS4BO75351 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VPS4BO75351 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS4BO75351 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS4BO75351 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
VPS4BO75351 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS4BO75351 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
VPS4BO75351 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS4BO75351 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS4BO75351 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS4BO75351 AC018529.3-201ENST00000624212 2254 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS4BO75351 RNU4-12P-201ENST00000365233 139 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 Y_RNA.372-201ENST00000365599 102 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
VPS4BO75351 RNU6-1207P-201ENST00000384343 107 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 SNORA70C-201ENST00000384538 135 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 RNA5SP397-201ENST00000391323 118 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 AL445189.1-201ENST00000405722 338 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 RNU4-55P-201ENST00000410731 137 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 AC004987.3-201ENST00000413879 771 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 AC245052.5-201ENST00000416320 649 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 AC127526.1-201ENST00000417526 366 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS4BO75351 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS4BO75351 MTCO2P11-201ENST00000431069 680 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS4BO75351 ARPC3P1-201ENST00000437218 533 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS4BO75351 RPL7P52-201ENST00000449200 742 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 snoU13.8-201ENST00000458890 104 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 RPS3AP14-201ENST00000483907 780 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms