Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SNORD16-201ENST00000362803 99 ntBASIC6.5□□□□□ -1.37
RNF40O75150 RNU6-804P-201ENST00000384286 107 ntBASIC6.5□□□□□ -1.37
RNF40O75150 SNORA69.1-201ENST00000390904 137 ntBASIC6.5□□□□□ -1.37
RNF40O75150 Y_RNA.581-201ENST00000391017 97 ntBASIC6.5□□□□□ -1.37
RNF40O75150 RN7SKP51-201ENST00000410781 304 ntBASIC6.5□□□□□ -1.37
RNF40O75150 RNA5SP111-201ENST00000411386 101 ntBASIC6.5□□□□□ -1.37
RNF40O75150 AC069213.2-201ENST00000420238 366 ntBASIC6.5□□□□□ -1.37
RNF40O75150 KRT8P51-201ENST00000438938 274 ntBASIC6.5□□□□□ -1.37
RNF40O75150 HLA-DPA3-207ENST00000454398 229 ntBASIC6.5□□□□□ -1.37
RNF40O75150 COX6CP14-201ENST00000469580 174 ntBASIC6.5□□□□□ -1.37
RNF40O75150 RN7SL643P-201ENST00000471845 291 ntBASIC6.5□□□□□ -1.37
RNF40O75150 AC098847.1-201ENST00000473094 348 ntBASIC6.5□□□□□ -1.37
RNF40O75150 MRPL42P6-201ENST00000486397 371 ntBASIC6.5□□□□□ -1.37
RNF40O75150 RPS24P16-201ENST00000497294 392 ntBASIC6.5□□□□□ -1.37
RNF40O75150 RPL7P47-201ENST00000497299 556 ntBASIC6.5□□□□□ -1.37
RNF40O75150 COX7A2P2-201ENST00000505291 250 ntBASIC6.5□□□□□ -1.37
RNF40O75150 AC025458.1-201ENST00000506046 166 ntBASIC6.5□□□□□ -1.37
RNF40O75150 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC6.5□□□□□ -1.37
RNF40O75150 IGKV1D-22-201ENST00000518953 324 ntBASIC6.5□□□□□ -1.37
RNF40O75150 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC6.5□□□□□ -1.37
RNF40O75150 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC6.5□□□□□ -1.37
RNF40O75150 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
RNF40O75150 MIR4504-201ENST00000577413 92 ntBASIC6.5□□□□□ -1.37
RNF40O75150 AC007448.1-201ENST00000582714 234 ntBASIC6.5□□□□□ -1.37
RNF40O75150 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC6.5□□□□□ -1.37
RNF40O75150 AC012119.1-201ENST00000603184 222 ntBASIC6.5□□□□□ -1.37
RNF40O75150 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.5□□□□□ -1.37
RNF40O75150 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.5□□□□□ -1.37
RNF40O75150 AC016745.2-201ENST00000608834 3443 ntBASIC6.5□□□□□ -1.37
RNF40O75150 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.5□□□□□ -1.37
RNF40O75150 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RNF40O75150 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RNF40O75150 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
RNF40O75150 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.5□□□□□ -1.37
RNF40O75150 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.5□□□□□ -1.37
RNF40O75150 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.49□□□□□ -1.37
RNF40O75150 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF40O75150 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF40O75150 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
RNF40O75150 MIR133A2-201ENST00000347538 102 ntBASIC6.49□□□□□ -1.37
RNF40O75150 RNA5SP453-201ENST00000362503 119 ntBASIC6.49□□□□□ -1.37
RNF40O75150 SNORD1C-201ENST00000363315 78 ntBASIC6.49□□□□□ -1.37
RNF40O75150 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC6.49□□□□□ -1.37
RNF40O75150 RNU2-15P-201ENST00000410692 191 ntBASIC6.49□□□□□ -1.37
RNF40O75150 RNU6-394P-201ENST00000410735 107 ntBASIC6.49□□□□□ -1.37
RNF40O75150 Y_RNA.626-201ENST00000411288 95 ntBASIC6.49□□□□□ -1.37
RNF40O75150 RNU6-516P-201ENST00000411381 104 ntBASIC6.49□□□□□ -1.37
RNF40O75150 AC069218.2-201ENST00000411665 344 ntBASIC6.49□□□□□ -1.37
RNF40O75150 PRUNEP1-201ENST00000425846 705 ntBASIC6.49□□□□□ -1.37
RNF40O75150 MTND3P9-201ENST00000429526 346 ntBASIC6.49□□□□□ -1.37
RNF40O75150 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC6.49□□□□□ -1.37
RNF40O75150 NUTF2P3-201ENST00000448540 384 ntBASIC6.49□□□□□ -1.37
RNF40O75150 CFL1P4-201ENST00000451536 498 ntBASIC6.49□□□□□ -1.37
RNF40O75150 FABP5P13-201ENST00000452144 328 ntBASIC6.49□□□□□ -1.37
RNF40O75150 PPIAP7-201ENST00000454070 489 ntBASIC6.49□□□□□ -1.37
RNF40O75150 AP000926.1-201ENST00000479573 241 ntBASIC6.49□□□□□ -1.37
RNF40O75150 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.49□□□□□ -1.37
RNF40O75150 KHDC1P1-201ENST00000511053 508 ntBASIC6.49□□□□□ -1.37
RNF40O75150 RNU6-313P-201ENST00000516317 112 ntBASIC6.49□□□□□ -1.37
RNF40O75150 WBP1LP3-201ENST00000523033 208 ntBASIC6.49□□□□□ -1.37
RNF40O75150 AP000620.1-201ENST00000527147 504 ntBASIC6.49□□□□□ -1.37
RNF40O75150 DEFB108D-201ENST00000527787 222 ntBASIC6.49□□□□□ -1.37
RNF40O75150 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.49□□□□□ -1.37
RNF40O75150 U6.106-201ENST00000636360 105 ntBASIC6.49□□□□□ -1.37
RNF40O75150 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF40O75150 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC6.49□□□□□ -1.37
RNF40O75150 AC074141.1-201ENST00000588129 2995 ntBASIC6.49□□□□□ -1.37
RNF40O75150 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF40O75150 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.49□□□□□ -1.37
RNF40O75150 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF40O75150 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF40O75150 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RNF40O75150 RNU6-858P-201ENST00000362436 107 ntBASIC6.48□□□□□ -1.37
RNF40O75150 Y_RNA.27-201ENST00000362540 103 ntBASIC6.48□□□□□ -1.37
RNF40O75150 Y_RNA.304-201ENST00000365011 112 ntBASIC6.48□□□□□ -1.37
RNF40O75150 RN7SKP186-201ENST00000365371 303 ntBASIC6.48□□□□□ -1.37
RNF40O75150 RN7SKP69-201ENST00000365390 305 ntBASIC6.48□□□□□ -1.37
RNF40O75150 RNU6-729P-201ENST00000384399 107 ntBASIC6.48□□□□□ -1.37
RNF40O75150 RNU6-45P-201ENST00000384471 107 ntBASIC6.48□□□□□ -1.37
RNF40O75150 RNU6-959P-201ENST00000384671 107 ntBASIC6.48□□□□□ -1.37
RNF40O75150 MIR130B-202ENST00000385018 82 ntBASIC6.48□□□□□ -1.37
RNF40O75150 SNORD73A-201ENST00000386062 65 ntBASIC6.48□□□□□ -1.37
RNF40O75150 RNU6-754P-201ENST00000391166 107 ntBASIC6.48□□□□□ -1.37
RNF40O75150 RN7SKP206-201ENST00000410823 293 ntBASIC6.48□□□□□ -1.37
RNF40O75150 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC6.48□□□□□ -1.37
RNF40O75150 GAPDHP48-201ENST00000436626 961 ntBASIC6.48□□□□□ -1.37
RNF40O75150 AL513124.1-201ENST00000450410 614 ntBASIC6.48□□□□□ -1.37
RNF40O75150 AC087190.1-201ENST00000484462 480 ntBASIC6.48□□□□□ -1.37
RNF40O75150 AC107032.1-201ENST00000485945 480 ntBASIC6.48□□□□□ -1.37
RNF40O75150 RPS17P5-201ENST00000498293 408 ntBASIC6.48□□□□□ -1.37
RNF40O75150 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC6.48□□□□□ -1.37
RNF40O75150 SEPT14P8-201ENST00000508026 178 ntBASIC6.48□□□□□ -1.37
RNF40O75150 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
RNF40O75150 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC6.48□□□□□ -1.37
RNF40O75150 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC6.48□□□□□ -1.37
RNF40O75150 AC005798.1-201ENST00000513715 387 ntBASIC6.48□□□□□ -1.37
RNF40O75150 IGHV4-55-201ENST00000520889 368 ntBASIC6.48□□□□□ -1.37
RNF40O75150 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC6.48□□□□□ -1.37
RNF40O75150 AC010186.2-204ENST00000537668 439 ntBASIC6.48□□□□□ -1.37
RNF40O75150 HNRNPCP4-201ENST00000571636 900 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 180.4 ms