Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.17□□□□□ -1.9
CHD2O14647 HMGB1P48-201ENST00000446155 598 ntBASIC3.17□□□□□ -1.9
CHD2O14647 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.17□□□□□ -1.9
CHD2O14647 AP000926.1-201ENST00000479573 241 ntBASIC3.17□□□□□ -1.9
CHD2O14647 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.17□□□□□ -1.9
CHD2O14647 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.17□□□□□ -1.9
CHD2O14647 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.17□□□□□ -1.9
CHD2O14647 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.17□□□□□ -1.9
CHD2O14647 OR7K1P-201ENST00000546439 926 ntBASIC3.17□□□□□ -1.9
CHD2O14647 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.17□□□□□ -1.9
CHD2O14647 AC103710.1-201ENST00000610003 901 ntBASIC3.17□□□□□ -1.9
CHD2O14647 U2.15-201ENST00000611544 191 ntBASIC3.17□□□□□ -1.9
CHD2O14647 U2.16-201ENST00000613119 191 ntBASIC3.17□□□□□ -1.9
CHD2O14647 U2.12-201ENST00000613778 191 ntBASIC3.17□□□□□ -1.9
CHD2O14647 U2.20-201ENST00000613956 192 ntBASIC3.17□□□□□ -1.9
CHD2O14647 U2.9-201ENST00000615427 191 ntBASIC3.17□□□□□ -1.9
CHD2O14647 U2.11-201ENST00000616345 191 ntBASIC3.17□□□□□ -1.9
CHD2O14647 U2.2-201ENST00000616535 191 ntBASIC3.17□□□□□ -1.9
CHD2O14647 U2.3-201ENST00000617785 191 ntBASIC3.17□□□□□ -1.9
CHD2O14647 U2.19-201ENST00000618602 191 ntBASIC3.17□□□□□ -1.9
CHD2O14647 RNU2-1-201ENST00000618664 191 ntBASIC3.17□□□□□ -1.9
CHD2O14647 U2.6-201ENST00000619225 191 ntBASIC3.17□□□□□ -1.9
CHD2O14647 U2.5-201ENST00000619465 191 ntBASIC3.17□□□□□ -1.9
CHD2O14647 U2.10-201ENST00000620268 191 ntBASIC3.17□□□□□ -1.9
CHD2O14647 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.17□□□□□ -1.9
CHD2O14647 AC080128.1-201ENST00000474389 1917 ntBASIC3.17□□□□□ -1.9
CHD2O14647 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHD2O14647 AC092447.7-201ENST00000422212 1621 ntBASIC3.17□□□□□ -1.9
CHD2O14647 AC011460.1-201ENST00000636268 1834 ntBASIC3.17□□□□□ -1.9
CHD2O14647 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHD2O14647 RNU4-31P-201ENST00000384211 141 ntBASIC3.16□□□□□ -1.9
CHD2O14647 RNA5SP213-201ENST00000391031 106 ntBASIC3.16□□□□□ -1.9
CHD2O14647 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CHD2O14647 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.16□□□□□ -1.9
CHD2O14647 NDUFB4P9-201ENST00000511646 388 ntBASIC3.16□□□□□ -1.9
CHD2O14647 AC025281.1-201ENST00000567026 265 ntBASIC3.16□□□□□ -1.9
CHD2O14647 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.16□□□□□ -1.9
CHD2O14647 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.16□□□□□ -1.9
CHD2O14647 AC011494.1-201ENST00000596454 237 ntBASIC3.16□□□□□ -1.9
CHD2O14647 AL356266.1-201ENST00000623311 483 ntBASIC3.16□□□□□ -1.9
CHD2O14647 AC116563.2-201ENST00000624751 535 ntBASIC3.16□□□□□ -1.9
CHD2O14647 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHD2O14647 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CHD2O14647 ZNF33CP-201ENST00000432492 2030 ntBASIC3.16□□□□□ -1.9
CHD2O14647 AL139156.1-201ENST00000412785 841 ntBASIC3.16□□□□□ -1.9
CHD2O14647 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.16□□□□□ -1.9
CHD2O14647 SNORD108-201ENST00000459332 71 ntBASIC3.16□□□□□ -1.9
CHD2O14647 AC132942.1-201ENST00000486753 483 ntBASIC3.16□□□□□ -1.9
CHD2O14647 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.16□□□□□ -1.9
CHD2O14647 AC008083.2-201ENST00000546707 476 ntBASIC3.16□□□□□ -1.9
CHD2O14647 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.16□□□□□ -1.9
CHD2O14647 AL022099.1-201ENST00000604551 712 ntBASIC3.16□□□□□ -1.9
CHD2O14647 AL589935.2-201ENST00000616471 1231 ntBASIC3.16□□□□□ -1.9
CHD2O14647 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.16□□□□□ -1.9
CHD2O14647 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CHD2O14647 RNU1-17P-201ENST00000363022 152 ntBASIC3.15□□□□□ -1.91
CHD2O14647 Y_RNA.164-201ENST00000363709 102 ntBASIC3.15□□□□□ -1.91
CHD2O14647 SNORA62.2-201ENST00000364672 152 ntBASIC3.15□□□□□ -1.91
CHD2O14647 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.15□□□□□ -1.91
CHD2O14647 MIR320B1-201ENST00000390209 79 ntBASIC3.15□□□□□ -1.91
CHD2O14647 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.15□□□□□ -1.91
CHD2O14647 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.15□□□□□ -1.91
CHD2O14647 AC013404.1-201ENST00000413068 249 ntBASIC3.15□□□□□ -1.91
CHD2O14647 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.15□□□□□ -1.91
CHD2O14647 AL157827.1-201ENST00000447622 132 ntBASIC3.15□□□□□ -1.91
CHD2O14647 HMGB3P30-201ENST00000457863 606 ntBASIC3.15□□□□□ -1.91
CHD2O14647 RPS27P27-201ENST00000498779 255 ntBASIC3.15□□□□□ -1.91
CHD2O14647 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.15□□□□□ -1.91
CHD2O14647 AC021146.7-201ENST00000509604 775 ntBASIC3.15□□□□□ -1.91
CHD2O14647 XKRY-201ENST00000510392 1100 ntBASIC3.15□□□□□ -1.91
CHD2O14647 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.15□□□□□ -1.91
CHD2O14647 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.15□□□□□ -1.91
CHD2O14647 AC103710.3-201ENST00000608157 948 ntBASIC3.15□□□□□ -1.91
CHD2O14647 AC002076.2-201ENST00000617362 122 ntBASIC3.15□□□□□ -1.91
CHD2O14647 MTND5P28-201ENST00000438005 1594 ntBASIC3.15□□□□□ -1.91
CHD2O14647 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CHD2O14647 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.15□□□□□ -1.91
CHD2O14647 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CHD2O14647 MTND5P29-201ENST00000458676 1807 ntBASIC3.15□□□□□ -1.91
CHD2O14647 RNU6-356P-201ENST00000384140 107 ntBASIC3.14□□□□□ -1.91
CHD2O14647 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.14□□□□□ -1.91
CHD2O14647 RNA5SP344-201ENST00000411081 104 ntBASIC3.14□□□□□ -1.91
CHD2O14647 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.14□□□□□ -1.91
CHD2O14647 YWHAZP7-201ENST00000436906 631 ntBASIC3.14□□□□□ -1.91
CHD2O14647 C1DP3-201ENST00000455013 423 ntBASIC3.14□□□□□ -1.91
CHD2O14647 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.14□□□□□ -1.91
CHD2O14647 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.14□□□□□ -1.91
CHD2O14647 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.14□□□□□ -1.91
CHD2O14647 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.14□□□□□ -1.91
CHD2O14647 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.14□□□□□ -1.91
CHD2O14647 RNU6-491P-201ENST00000516099 110 ntBASIC3.14□□□□□ -1.91
CHD2O14647 HSPE1P18-201ENST00000517602 280 ntBASIC3.14□□□□□ -1.91
CHD2O14647 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.14□□□□□ -1.91
CHD2O14647 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.14□□□□□ -1.91
CHD2O14647 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.14□□□□□ -1.91
CHD2O14647 AC015726.3-201ENST00000624501 418 ntBASIC3.14□□□□□ -1.91
CHD2O14647 MTCO1P14-201ENST00000441695 1559 ntBASIC3.14□□□□□ -1.91
CHD2O14647 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.14□□□□□ -1.91
CHD2O14647 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CHD2O14647 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms