Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC133473.1-201ENST00000455173 299 ntBASIC4.37□□□□□ -1.71
TRIM38O00635 RPL31P58-201ENST00000469001 379 ntBASIC4.37□□□□□ -1.71
TRIM38O00635 AC017015.1-201ENST00000477387 286 ntBASIC4.37□□□□□ -1.71
TRIM38O00635 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM38O00635 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM38O00635 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM38O00635 Y_RNA.702-201ENST00000516843 96 ntBASIC4.37□□□□□ -1.71
TRIM38O00635 MIR2116-201ENST00000517221 80 ntBASIC4.37□□□□□ -1.71
TRIM38O00635 IFITM8P-201ENST00000522529 394 ntBASIC4.37□□□□□ -1.71
TRIM38O00635 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM38O00635 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.37□□□□□ -1.71
TRIM38O00635 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.37□□□□□ -1.71
TRIM38O00635 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM38O00635 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM38O00635 CYP4A43P-201ENST00000568156 121 ntBASIC4.37□□□□□ -1.71
TRIM38O00635 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM38O00635 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM38O00635 AL121757.2-201ENST00000611223 313 ntBASIC4.37□□□□□ -1.71
TRIM38O00635 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM38O00635 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM38O00635 AC090517.2-201ENST00000614966 680 ntBASIC4.37□□□□□ -1.71
TRIM38O00635 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM38O00635 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM38O00635 AC099654.14-201ENST00000638599 341 ntBASIC4.37□□□□□ -1.71
TRIM38O00635 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM38O00635 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM38O00635 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM38O00635 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM38O00635 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM38O00635 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
TRIM38O00635 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM38O00635 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM38O00635 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM38O00635 CPHL1P-201ENST00000461341 3407 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM38O00635 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM38O00635 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
TRIM38O00635 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TRIM38O00635 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM38O00635 RNA5SP258-201ENST00000362750 119 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 RNU6-501P-201ENST00000364072 100 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 RNU4-76P-201ENST00000364509 141 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 XGY1-201ENST00000381172 446 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 RNU1-63P-201ENST00000383902 164 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 MIR513A2-201ENST00000385249 127 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 MIR134-201ENST00000385258 73 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 AC007066.1-201ENST00000392902 381 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 RNA5SP317-201ENST00000410176 116 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 RNU2-41P-201ENST00000410991 178 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 RNA5SP311-201ENST00000411290 116 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 RPL7P8-201ENST00000411964 730 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM38O00635 OR51A5P-201ENST00000415429 942 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 AC004552.1-201ENST00000419089 348 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.36□□□□□ -1.71
TRIM38O00635 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM38O00635 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM38O00635 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.36□□□□□ -1.71
TRIM38O00635 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM38O00635 RSU1P2-202ENST00000437884 485 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM38O00635 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TRIM38O00635 AL353748.1-201ENST00000440753 474 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 COX6CP2-201ENST00000444980 225 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM38O00635 DHFRP3-201ENST00000455595 559 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 UBDP1-202ENST00000457888 382 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM38O00635 RPL30P9-201ENST00000465586 330 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 AC091153.1-201ENST00000466297 402 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 HMGB1P25-201ENST00000468402 607 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 RPS26P3-201ENST00000470205 348 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 AC090543.2-201ENST00000483963 348 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 AC004057.1-201ENST00000485827 348 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 AC023424.2-201ENST00000493479 777 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 COX7A2P2-201ENST00000505291 250 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 RNU6-507P-201ENST00000516045 100 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 RNA5SP315-201ENST00000516340 116 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 RNA5SP312-201ENST00000517068 116 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 AP003392.2-201ENST00000527269 208 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 TRAV8-5-201ENST00000537369 341 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.36□□□□□ -1.71
TRIM38O00635 SETP7-201ENST00000552169 453 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM38O00635 FGF7P1-201ENST00000582820 288 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 AC008507.1-201ENST00000587506 734 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 AL139395.1-201ENST00000603662 160 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 AL591034.3-201ENST00000605511 685 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 AC055876.5-201ENST00000605667 259 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 AL031666.3-201ENST00000609320 1006 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 AC006065.6-201ENST00000625201 545 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM38O00635 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TRIM38O00635 AC011266.1-201ENST00000624119 3569 ntBASIC4.36□□□□□ -1.71
TRIM38O00635 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
TRIM38O00635 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM38O00635 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM38O00635 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM38O00635 MTND5P17-201ENST00000418405 1603 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms