Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CBX4O00257 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.64
CBX4O00257 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CBX4O00257 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.78□□□□□ -1.64
CBX4O00257 U3.11-201ENST00000364476 212 ntBASIC4.78□□□□□ -1.64
CBX4O00257 RNU6-837P-201ENST00000391056 108 ntBASIC4.78□□□□□ -1.64
CBX4O00257 AC092447.6-201ENST00000414578 210 ntBASIC4.78□□□□□ -1.64
CBX4O00257 AC138393.2-201ENST00000414742 246 ntBASIC4.78□□□□□ -1.64
CBX4O00257 OR1AA1P-201ENST00000419597 916 ntBASIC4.78□□□□□ -1.64
CBX4O00257 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.78□□□□□ -1.64
CBX4O00257 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.78□□□□□ -1.64
CBX4O00257 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.78□□□□□ -1.64
CBX4O00257 RPL23AP30-201ENST00000432419 501 ntBASIC4.78□□□□□ -1.64
CBX4O00257 SEPT14P3-201ENST00000439401 183 ntBASIC4.78□□□□□ -1.64
CBX4O00257 BNIP3P2-201ENST00000441221 577 ntBASIC4.78□□□□□ -1.64
CBX4O00257 AL732372.2-207ENST00000445840 183 ntBASIC4.78□□□□□ -1.64
CBX4O00257 ARL2BPP10-201ENST00000446487 531 ntBASIC4.78□□□□□ -1.64
CBX4O00257 AC010655.1-201ENST00000449336 292 ntBASIC4.78□□□□□ -1.64
CBX4O00257 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.78□□□□□ -1.64
CBX4O00257 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.78□□□□□ -1.64
CBX4O00257 FDX1P2-201ENST00000450769 375 ntBASIC4.78□□□□□ -1.64
CBX4O00257 SEPT14P2-201ENST00000453405 183 ntBASIC4.78□□□□□ -1.64
CBX4O00257 RNU6-420P-201ENST00000458780 107 ntBASIC4.78□□□□□ -1.64
CBX4O00257 AC083798.1-201ENST00000472671 131 ntBASIC4.78□□□□□ -1.64
CBX4O00257 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.78□□□□□ -1.64
CBX4O00257 HMGB3P16-201ENST00000508037 287 ntBASIC4.78□□□□□ -1.64
CBX4O00257 TMEM248P1-201ENST00000510579 951 ntBASIC4.78□□□□□ -1.64
CBX4O00257 SEPT14P4-201ENST00000513445 186 ntBASIC4.78□□□□□ -1.64
CBX4O00257 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.78□□□□□ -1.64
CBX4O00257 FO082796.1-201ENST00000523795 183 ntBASIC4.78□□□□□ -1.64
CBX4O00257 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.78□□□□□ -1.64
CBX4O00257 AC105224.1-201ENST00000587055 421 ntBASIC4.78□□□□□ -1.64
CBX4O00257 AC060780.3-201ENST00000589464 80 ntBASIC4.78□□□□□ -1.64
CBX4O00257 AC006254.3-201ENST00000603353 884 ntBASIC4.78□□□□□ -1.64
CBX4O00257 AL158211.4-201ENST00000606988 584 ntBASIC4.78□□□□□ -1.64
CBX4O00257 AC019193.2-201ENST00000610012 634 ntBASIC4.78□□□□□ -1.64
CBX4O00257 AC068831.8-201ENST00000620171 435 ntBASIC4.78□□□□□ -1.64
CBX4O00257 MIR3662-201ENST00000637030 95 ntBASIC4.78□□□□□ -1.64
CBX4O00257 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CBX4O00257 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.78□□□□□ -1.64
CBX4O00257 NXPH1-205ENST00000602349 1953 ntBASIC4.78□□□□□ -1.64
CBX4O00257 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CBX4O00257 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.78□□□□□ -1.64
CBX4O00257 ZFRP1-201ENST00000457579 2970 ntBASIC4.77□□□□□ -1.65
CBX4O00257 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CBX4O00257 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.77□□□□□ -1.65
CBX4O00257 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.77□□□□□ -1.65
CBX4O00257 AL672167.1-204ENST00000641875 3017 ntBASIC4.77□□□□□ -1.65
CBX4O00257 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
CBX4O00257 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CBX4O00257 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CBX4O00257 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CBX4O00257 SNORD56.2-201ENST00000363242 71 ntBASIC4.77□□□□□ -1.65
CBX4O00257 RNU5E-8P-201ENST00000363502 116 ntBASIC4.77□□□□□ -1.65
CBX4O00257 SNORA71.2-201ENST00000364941 134 ntBASIC4.77□□□□□ -1.65
CBX4O00257 UBBP2-201ENST00000376781 231 ntBASIC4.77□□□□□ -1.65
CBX4O00257 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CBX4O00257 RNU6-432P-201ENST00000384196 109 ntBASIC4.77□□□□□ -1.65
CBX4O00257 Z98745.1-201ENST00000402553 494 ntBASIC4.77□□□□□ -1.65
CBX4O00257 AP000580.1-201ENST00000404439 358 ntBASIC4.77□□□□□ -1.65
CBX4O00257 RNU2-9P-201ENST00000410194 145 ntBASIC4.77□□□□□ -1.65
CBX4O00257 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.77□□□□□ -1.65
CBX4O00257 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.77□□□□□ -1.65
CBX4O00257 SNRPEP10-201ENST00000420249 274 ntBASIC4.77□□□□□ -1.65
CBX4O00257 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.77□□□□□ -1.65
CBX4O00257 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.77□□□□□ -1.65
CBX4O00257 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.77□□□□□ -1.65
CBX4O00257 OR4K11P-201ENST00000431829 904 ntBASIC4.77□□□□□ -1.65
CBX4O00257 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CBX4O00257 MRPS18BP2-201ENST00000434310 759 ntBASIC4.77□□□□□ -1.65
CBX4O00257 AL121601.2-201ENST00000438019 707 ntBASIC4.77□□□□□ -1.65
CBX4O00257 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.77□□□□□ -1.65
CBX4O00257 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.77□□□□□ -1.65
CBX4O00257 AC104651.2-201ENST00000447549 528 ntBASIC4.77□□□□□ -1.65
CBX4O00257 AC114755.5-201ENST00000447760 831 ntBASIC4.77□□□□□ -1.65
CBX4O00257 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.77□□□□□ -1.65
CBX4O00257 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.77□□□□□ -1.65
CBX4O00257 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.77□□□□□ -1.65
CBX4O00257 AC025164.1-201ENST00000496249 478 ntBASIC4.77□□□□□ -1.65
CBX4O00257 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CBX4O00257 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CBX4O00257 AC083829.1-201ENST00000503756 657 ntBASIC4.77□□□□□ -1.65
CBX4O00257 AC117522.1-201ENST00000509821 380 ntBASIC4.77□□□□□ -1.65
CBX4O00257 SCARNA24.1-201ENST00000516465 137 ntBASIC4.77□□□□□ -1.65
CBX4O00257 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.77□□□□□ -1.65
CBX4O00257 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.77□□□□□ -1.65
CBX4O00257 AL109766.1-201ENST00000555080 552 ntBASIC4.77□□□□□ -1.65
CBX4O00257 AL133153.1-201ENST00000557756 303 ntBASIC4.77□□□□□ -1.65
CBX4O00257 AC233702.9-201ENST00000581528 203 ntBASIC4.77□□□□□ -1.65
CBX4O00257 RN7SL690P-201ENST00000582087 240 ntBASIC4.77□□□□□ -1.65
CBX4O00257 AC005730.3-201ENST00000583067 366 ntBASIC4.77□□□□□ -1.65
CBX4O00257 AL049634.3-201ENST00000604968 457 ntBASIC4.77□□□□□ -1.65
CBX4O00257 AC010680.4-201ENST00000605334 543 ntBASIC4.77□□□□□ -1.65
CBX4O00257 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.77□□□□□ -1.65
CBX4O00257 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.77□□□□□ -1.65
CBX4O00257 AC022106.2-201ENST00000620114 757 ntBASIC4.77□□□□□ -1.65
CBX4O00257 AC244100.1-202ENST00000621554 382 ntBASIC4.77□□□□□ -1.65
CBX4O00257 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CBX4O00257 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CBX4O00257 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms