Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.17□□□□□ -1.9
AP3B1O00203 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.17□□□□□ -1.9
AP3B1O00203 AC011260.1-201ENST00000578420 472 ntBASIC3.17□□□□□ -1.9
AP3B1O00203 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.17□□□□□ -1.9
AP3B1O00203 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.17□□□□□ -1.9
AP3B1O00203 AC079089.3-201ENST00000603094 673 ntBASIC3.17□□□□□ -1.9
AP3B1O00203 AL133507.1-201ENST00000605269 557 ntBASIC3.17□□□□□ -1.9
AP3B1O00203 AC231759.1-201ENST00000616455 597 ntBASIC3.17□□□□□ -1.9
AP3B1O00203 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.17□□□□□ -1.9
AP3B1O00203 AL445493.3-201ENST00000619568 477 ntBASIC3.17□□□□□ -1.9
AP3B1O00203 AL356585.4-201ENST00000623078 1229 ntBASIC3.17□□□□□ -1.9
AP3B1O00203 AC026634.1-201ENST00000634369 198 ntBASIC3.17□□□□□ -1.9
AP3B1O00203 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.17□□□□□ -1.9
AP3B1O00203 MTCO1P23-201ENST00000415223 1526 ntBASIC3.17□□□□□ -1.9
AP3B1O00203 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
AP3B1O00203 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
AP3B1O00203 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
AP3B1O00203 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
AP3B1O00203 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.16□□□□□ -1.9
AP3B1O00203 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.16□□□□□ -1.9
AP3B1O00203 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
AP3B1O00203 RNU6-1155P-201ENST00000363554 107 ntBASIC3.16□□□□□ -1.9
AP3B1O00203 SNORA7.4-201ENST00000384249 137 ntBASIC3.16□□□□□ -1.9
AP3B1O00203 MIR490-201ENST00000384865 128 ntBASIC3.16□□□□□ -1.9
AP3B1O00203 MIR134-201ENST00000385258 73 ntBASIC3.16□□□□□ -1.9
AP3B1O00203 SNORA26.7-201ENST00000391288 122 ntBASIC3.16□□□□□ -1.9
AP3B1O00203 AC110754.1-201ENST00000399740 601 ntBASIC3.16□□□□□ -1.9
AP3B1O00203 RN7SKP220-201ENST00000410611 288 ntBASIC3.16□□□□□ -1.9
AP3B1O00203 RPL7P10-201ENST00000417407 739 ntBASIC3.16□□□□□ -1.9
AP3B1O00203 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.16□□□□□ -1.9
AP3B1O00203 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.16□□□□□ -1.9
AP3B1O00203 NDUFB4P6-201ENST00000436819 366 ntBASIC3.16□□□□□ -1.9
AP3B1O00203 AC108734.1-201ENST00000439549 399 ntBASIC3.16□□□□□ -1.9
AP3B1O00203 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
AP3B1O00203 RPL21P133-201ENST00000443666 476 ntBASIC3.16□□□□□ -1.9
AP3B1O00203 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.16□□□□□ -1.9
AP3B1O00203 AL353718.1-201ENST00000451028 517 ntBASIC3.16□□□□□ -1.9
AP3B1O00203 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.16□□□□□ -1.9
AP3B1O00203 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.16□□□□□ -1.9
AP3B1O00203 RNU7-140P-201ENST00000459546 60 ntBASIC3.16□□□□□ -1.9
AP3B1O00203 OR52A4P-202ENST00000481634 799 ntBASIC3.16□□□□□ -1.9
AP3B1O00203 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.16□□□□□ -1.9
AP3B1O00203 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.16□□□□□ -1.9
AP3B1O00203 AC009901.1-201ENST00000506703 541 ntBASIC3.16□□□□□ -1.9
AP3B1O00203 AC006445.2-201ENST00000510061 472 ntBASIC3.16□□□□□ -1.9
AP3B1O00203 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.16□□□□□ -1.9
AP3B1O00203 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.16□□□□□ -1.9
AP3B1O00203 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.16□□□□□ -1.9
AP3B1O00203 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.16□□□□□ -1.9
AP3B1O00203 MIR3609-201ENST00000582661 80 ntBASIC3.16□□□□□ -1.9
AP3B1O00203 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.16□□□□□ -1.9
AP3B1O00203 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.16□□□□□ -1.9
AP3B1O00203 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.16□□□□□ -1.9
AP3B1O00203 HSPE1P7-201ENST00000604681 321 ntBASIC3.16□□□□□ -1.9
AP3B1O00203 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.16□□□□□ -1.9
AP3B1O00203 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
AP3B1O00203 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
AP3B1O00203 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
AP3B1O00203 TAB3P1-202ENST00000452645 1634 ntBASIC3.15□□□□□ -1.9
AP3B1O00203 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
AP3B1O00203 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
AP3B1O00203 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
AP3B1O00203 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
AP3B1O00203 AC138915.1-201ENST00000565427 1685 ntBASIC3.15□□□□□ -1.9
AP3B1O00203 AL589826.1-201ENST00000340697 249 ntBASIC3.15□□□□□ -1.91
AP3B1O00203 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
AP3B1O00203 RNU6-839P-201ENST00000363347 108 ntBASIC3.15□□□□□ -1.91
AP3B1O00203 RNU6-878P-201ENST00000384578 110 ntBASIC3.15□□□□□ -1.91
AP3B1O00203 MIR887-201ENST00000401258 79 ntBASIC3.15□□□□□ -1.91
AP3B1O00203 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.15□□□□□ -1.91
AP3B1O00203 RPL7P30-201ENST00000420888 709 ntBASIC3.15□□□□□ -1.91
AP3B1O00203 SFR1P2-201ENST00000421841 730 ntBASIC3.15□□□□□ -1.91
AP3B1O00203 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.15□□□□□ -1.91
AP3B1O00203 HMGN2P30-201ENST00000423237 256 ntBASIC3.15□□□□□ -1.91
AP3B1O00203 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.15□□□□□ -1.91
AP3B1O00203 AL592437.1-201ENST00000443781 492 ntBASIC3.15□□□□□ -1.91
AP3B1O00203 Z96811.1-201ENST00000445880 108 ntBASIC3.15□□□□□ -1.91
AP3B1O00203 GXYLT1P1-201ENST00000446657 490 ntBASIC3.15□□□□□ -1.91
AP3B1O00203 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.15□□□□□ -1.91
AP3B1O00203 Z82190.1-201ENST00000454534 490 ntBASIC3.15□□□□□ -1.91
AP3B1O00203 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.15□□□□□ -1.91
AP3B1O00203 AP002812.1-201ENST00000495378 474 ntBASIC3.15□□□□□ -1.91
AP3B1O00203 DSTNP2-201ENST00000504533 515 ntBASIC3.15□□□□□ -1.91
AP3B1O00203 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
AP3B1O00203 AP001317.1-201ENST00000531194 960 ntBASIC3.15□□□□□ -1.91
AP3B1O00203 AP000867.2-201ENST00000532468 320 ntBASIC3.15□□□□□ -1.91
AP3B1O00203 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.15□□□□□ -1.91
AP3B1O00203 NBEAP1-201ENST00000554452 979 ntBASIC3.15□□□□□ -1.91
AP3B1O00203 MTCYBP27-201ENST00000555160 670 ntBASIC3.15□□□□□ -1.91
AP3B1O00203 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.15□□□□□ -1.91
AP3B1O00203 RPL21P12-201ENST00000559810 515 ntBASIC3.15□□□□□ -1.91
AP3B1O00203 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.15□□□□□ -1.91
AP3B1O00203 AC008739.3-201ENST00000603262 127 ntBASIC3.15□□□□□ -1.91
AP3B1O00203 RPL23AP92-201ENST00000603609 255 ntBASIC3.15□□□□□ -1.91
AP3B1O00203 AL109618.2-201ENST00000605527 211 ntBASIC3.15□□□□□ -1.91
AP3B1O00203 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
AP3B1O00203 AC099506.2-201ENST00000623074 221 ntBASIC3.15□□□□□ -1.91
AP3B1O00203 AC002064.3-201ENST00000623448 346 ntBASIC3.15□□□□□ -1.91
AP3B1O00203 AL121594.5-201ENST00000631724 573 ntBASIC3.15□□□□□ -1.91
AP3B1O00203 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms